RNA–Protein interactions for RNA: ENST00000537297.2

USP15-204, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-204ENST00000537297 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
USP15-204ENST00000537297 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
USP15-204ENST00000537297 CYP39A1Q9NYL5 469 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
USP15-204ENST00000537297 ASB14A6NK59 587 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 GRXCR1A8MXD5 290 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 ARVCFO00192 962 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 NFIBO00712 420 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 CTAGE5O15320 804 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 ORC4O43929 436 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 TIMP1P01033 207 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
USP15-204ENST00000537297 CSF2RAP15509 400 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 SMPD1P17405 629 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 CALML3P27482 149 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 CYP2C18P33260 490 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 PSMC6P62333 389 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
USP15-204ENST00000537297 FSCN1Q16658 493 aaKnown RBP12.5□□□□□ -0.41
USP15-204ENST00000537297 TKFCQ3LXA3 575 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP15-204ENST00000537297 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 TOX2Q96NM4 488 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP15-204ENST00000537297 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 LRRC37A2A6NM11 1700 aa12.5□□□□□ -0.41
USP15-204ENST00000537297 ELP1O95163 1332 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 NEDD4P46934 1319 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 MROH7Q68CQ1 1323 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
USP15-204ENST00000537297 ICAM1P05362 532 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 TOP1P11387 765 aaKnown RBP12.49□□□□□ -0.41
USP15-204ENST00000537297 CST5P28325 142 aaPredicted RBP12.49□□□□□ -0.41
USP15-204ENST00000537297 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
USP15-204ENST00000537297 ALX1Q15699 326 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 SLC30A10Q6XR72 485 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
USP15-204ENST00000537297 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 UMODL1Q5DID0 1318 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 PLA2G6O60733 806 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 DNAJB2P25686 324 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 CDK7P50613 346 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 CCL23P55773 120 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 USH1GQ495M9 461 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 MFSD5Q6N075 450 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 C16orf59Q7L2K0 433 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 FAM126BQ8IXS8 530 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 NECAB3Q96P71 396 aaPredicted RBP12.48□□□□□ -0.41
USP15-204ENST00000537297 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
USP15-204ENST00000537297 THEGQ9P2T0 379 aa12.48□□□□□ -0.41
USP15-204ENST00000537297 LCTP09848 1927 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
USP15-204ENST00000537297 IGHDP01880 384 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 MYL3P08590 195 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 PDHBP11177 359 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
USP15-204ENST00000537297 ITGA7Q13683 1181 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
USP15-204ENST00000537297 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
USP15-204ENST00000537297 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
USP15-204ENST00000537297 GNEQ9Y223 722 aaKnown RBP12.47□□□□□ -0.41
USP15-204ENST00000537297 GRIN2DO15399 1336 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.46□□□□□ -0.41
USP15-204ENST00000537297 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.46□□□□□ -0.41
USP15-204ENST00000537297 ZEB2O60315 1214 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 FGRP09769 529 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 SDSP20132 328 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 ALDH5A1P51649 535 aaPredicted RBP12.46□□□□□ -0.41
USP15-204ENST00000537297 MRPS5P82675 430 aaKnown RBP12.46□□□□□ -0.41
USP15-204ENST00000537297 PDE4DQ08499 809 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 FAM47CQ5HY64 1035 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 TMEM240Q5SV17 173 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 RNF207Q6ZRF8 634 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 LRFN3Q9BTN0 628 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 ZNF576Q9H609 170 aa12.46□□□□□ -0.41
USP15-204ENST00000537297 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms