RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	GRM1	Q13255	1194 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	PDCD2	Q16342	344 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-210	ENST00000537064	RSRC2	Q7L4I2	434 aa	Known RBP	11.71	□□□□□ -0.53
POLE-210	ENST00000537064	DONSON	Q9NYP3	566 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	ANGPTL2	Q9UKU9	493 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	CHD1	O14646	1710 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	GC	P02774	474 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	CFAP157	Q5JU67	520 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.71	□□□□□ -0.53
POLE-210	ENST00000537064	MIGA1	Q8NAN2	632 aa		11.71	□□□□□ -0.53
POLE-210	ENST00000537064	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-210	ENST00000537064	TMEM232	C9JQI7	657 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	THAP12	O43422	761 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	SATB1	Q01826	763 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	DHX9	Q08211	1270 aa	Known RBP	11.71	□□□□□ -0.54
POLE-210	ENST00000537064	ORC2	Q13416	577 aa	Predicted RBP	11.71	□□□□□ -0.54
POLE-210	ENST00000537064	PARP10	Q53GL7	1025 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.71	□□□□□ -0.54
POLE-210	ENST00000537064	TRIM42	Q8IWZ5	723 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	NLRC4	Q9NPP4	1024 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	NFU1	Q9UMS0	254 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	PRPF3	O43395	683 aa	Known RBP	11.71	□□□□□ -0.54
POLE-210	ENST00000537064	SMC1B	Q8NDV3	1235 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	ENGASE	Q8NFI3	743 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	LRRC8C	Q8TDW0	803 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	GRAMD1A	Q96CP6	724 aa		11.71	□□□□□ -0.54
POLE-210	ENST00000537064	MPHOSPH6	Q99547	160 aa	Known RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ZMYND12	Q9H0C1	365 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	5e-7	■■■□□ 18.8
POLE-210	ENST00000537064	CAPN11	Q9UMQ6	739 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	PLEKHG2	Q9H7P9	1386 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	SOS2	Q07890	1332 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	IRAK1	P51617	712 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	PLCB3	Q01970	1234 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	CTDSPL2	Q05D32	466 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	PPRC1	Q5VV67	1664 aa	Known RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064		A0A087WWV3	80 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	hCG_1984214	I3L0E3	225 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ZWINT	O95229	277 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ADCY7	P51828	1080 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ZNF713	Q8N859	430 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	SH3GLB2	Q9NR46	395 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	LIMA1	Q9UHB6	759 aa	Known RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	DNM3	Q9UQ16	869 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ALK	Q9UM73	1620 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	MAPK13	O15264	365 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	SASH1	O94885	1247 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	MDH1	P40925	334 aa	Known RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	RABGAP1	Q9Y3P9	1069 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064		M0R2C6	588 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	SLITRK6	Q9H5Y7	841 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	STOML1	Q9UBI4	398 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	FOXP2	O15409	715 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	ZPR1	O75312	459 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	CHMP6	Q96FZ7	201 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	FGFR1OP2	Q9NVK5	253 aa		11.7	□□□□□ -0.54
POLE-210	ENST00000537064	TLR7	Q9NYK1	1049 aa	Known RBP	11.7	□□□□□ -0.54
POLE-210	ENST00000537064	EIF4A3	P38919	411 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	MAP7D1	Q3KQU3	841 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	RAB3IL1	Q8TBN0	382 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	TXNDC16	Q9P2K2	825 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	PPFIA2	O75334	1257 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	FAM107A	O95990	144 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	ANXA13	P27216	316 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	REXO1L1P	Q8IX06	675 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	HOOK2	Q96ED9	719 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	RAB21	Q9UL25	225 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	TNKS	O95271	1327 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	DTNB	O60941	627 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	DNAJC8	O75937	253 aa	Predicted RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	DBN1	Q16643	649 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	PPP1R2P3	Q6NXS1	205 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	ZNF804A	Q7Z570	1209 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	NEK8	Q86SG6	692 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	ZNF354C	Q86Y25	554 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	TC2N	Q8N9U0	490 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	EXOC7	Q9UPT5	735 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	NDUFB9	Q9Y6M9	179 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	MME	P08473	750 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	EXOSC10	Q01780	885 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	AGBL2	Q5U5Z8	902 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	STAM	Q92783	540 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	IWS1	Q96ST2	819 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	NYX	Q9GZU5	481 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	SNX12	Q9UMY4	172 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	RASSF10	A6NK89	507 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	HNRNPH1	P31943	449 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	SMTN	P53814	917 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	L1RE1	Q9UN81	338 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	MAP3K7	O43318	606 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	MOCS3	O95396	460 aa		11.69	□□□□□ -0.54
POLE-210	ENST00000537064	POLR2F	P61218	127 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	DDX27	Q96GQ7	796 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	NOVA2	Q9UNW9	492 aa	Known RBP	11.69	□□□□□ -0.54
POLE-210	ENST00000537064	ADD2	P35612	726 aa		11.68	□□□□□ -0.54
POLE-210	ENST00000537064	TXK	P42681	527 aa		11.68	□□□□□ -0.54
POLE-210	ENST00000537064	DEUP1	Q05D60	604 aa		11.68	□□□□□ -0.54
POLE-210	ENST00000537064	TMCO4	Q5TGY1	634 aa		11.68	□□□□□ -0.54
POLE-210	ENST00000537064	RASGRF2	O14827	1237 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms