RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TEX33O43247 280 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 RANBP6O60518 1105 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 N4BP1O75113 896 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 USP2O75604 605 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 PRPF6O94906 941 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 IPO7O95373 1038 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 UQCRFS1P1P0C7P4 283 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 GRK4P32298 578 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 ARHGAP25P42331 645 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 MAGEA10P43363 369 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 ZAP70P43403 619 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 COPB1P53618 953 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 AKAP17AQ02040 695 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 CUL4BQ13620 913 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 RTN1Q16799 776 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 HSP90AA4PQ58FG1 418 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 DACT2Q5SW24 774 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 NBPF12Q5TAG4 269 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 MCTP2Q6DN12 878 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 CYB5R4Q7L1T6 521 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 TRAPPC11Q7Z392 1133 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 SH3RF1Q7Z6J0 888 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 RPAINQ86UA6 219 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 APOBEC3FQ8IUX4 373 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 AMOTL1Q8IY63 956 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 C7orf61Q8IZ16 206 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 COG1Q8WTW3 980 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 CPLX3Q8WVH0 158 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 NUP88Q99567 741 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 PUS7LQ9H0K6 701 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 UNC93B1Q9H1C4 597 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 LY9Q9HBG7 655 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 BIN2Q9UBW5 565 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 RWDD2AQ9UIY3 292 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 RIPOR2Q9Y4F9 1068 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 ATXN2Q99700 1313 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 TMEM265A0A087WTH1 108 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CCL15-CCL14A0A0B4J2E2 113 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 LRRC10BA6NIK2 292 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 LRRIQ3A6PVS8 624 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 KRT86O43790 486 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 ERLIN2O94905 339 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CLSTN1O94985 981 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 SGPL1O95470 568 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 GYPCP04921 128 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 APPP05067 770 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CYLC1P35663 651 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 RPS8P62241 208 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 KIF22Q14807 665 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CCL15Q16663 113 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 PTPN21Q16825 1174 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 PAPD7Q5XG87 772 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 KLHL10Q6JEL2 608 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 B4GALNT4Q76KP1 1039 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 ACRBPQ8NEB7 543 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 IGDCC4Q8TDY8 1250 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 NOC3LQ8WTT2 800 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 IQCDQ96DY2 449 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 FAM89AQ96GI7 184 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 PAGE5Q96GU1 130 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 PAWRQ96IZ0 340 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CDC5LQ99459 802 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 TACO1Q9BSH4 297 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 NUP58Q9BVL2 599 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 TSGA10Q9BZW7 698 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 SEC31BQ9NQW1 1179 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 ZNHIT6Q9NWK9 470 aaKnown RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 PCDHAC2Q9Y5I4 1007 aa8.68□□□□□ -1.02
CPSF7-216ENST00000536548 EPN1Q9Y6I3 576 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-216ENST00000536548 A0A1W2PQC6 194 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GOLGA6CA6NDK9 693 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 B4E1Z4 1266 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 TLR2O60603 784 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PHACTR2O75167 634 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 NDUFA10O95299 355 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 SYF2O95926 243 aaKnown RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 TFRCP02786 760 aaKnown RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GOLGA6DP0CG33 693 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GNAT2P19087 354 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 OSBPP22059 807 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 KRT9P35527 623 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PSMC4P43686 418 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 TOB1P50616 345 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 ERVK-24P63145 666 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 APBA1Q02410 837 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms