RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PIGSQ96S52 555 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 RMDN3Q96TC7 470 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 MTMR10Q9NXD2 777 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 PCDHA1Q9Y5I3 950 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 ARIH2O95376 493 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 CSF2RAP15509 400 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 CYP2C18P33260 490 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 PURAQ00577 322 aaKnown RBP16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 BRDTQ58F21 947 aaPredicted RBP16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 MTMR8Q96EF0 704 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 MAF1Q9H063 256 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 MYH6P13533 1939 aa16.6■□□□□ 0.25
RTN3P1-201ENST00000536295 OPLAHO14841 1288 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 PRC1O43663 620 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 B4GALT4O60513 344 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 TROAPQ12815 778 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 STXBP2Q15833 593 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 ZNF697Q5TEC3 545 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 CASC1Q6TDU7 716 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 TMEM199Q8N511 208 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 IWS1Q96ST2 819 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
RTN3P1-201ENST00000536295 SLC27A2O14975 620 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 CYTH3O43739 400 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 ACRP10323 421 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 HSD17B4P51659 736 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 LY6KQ17RY6 165 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 RIOX1Q9H6W3 641 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 PXMP2Q9NR77 195 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 UMODL1Q5DID0 1318 aa16.58■□□□□ 0.24
RTN3P1-201ENST00000536295 NR3C2P08235 984 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 CCL23P55773 120 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 SMAD3P84022 425 aaKnown RBP16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 CCDC62Q6P9F0 684 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 SEZ6LQ9BYH1 1024 aa16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 TRMT13Q9NUP7 481 aaKnown RBP16.57■□□□□ 0.24
RTN3P1-201ENST00000536295 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 A6NJR5 290 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 GH1P01241 217 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 MCM5P33992 734 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 TRAF1Q13077 416 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 TMEM240Q5SV17 173 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 FCHSD1Q86WN1 690 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 STXBP5LQ9Y2K9 1186 aa16.56■□□□□ 0.24
RTN3P1-201ENST00000536295 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 GCOM1H8Y6P7 765 aaPredicted RBP16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 KPNA6O60684 536 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 DDAH1O94760 285 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 POLR2MP0CAP2 368 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 CYP2C9P11712 490 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 RXRAP19793 462 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 GHRHRQ02643 423 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 MAP3K20Q9NYL2 800 aaKnown RBP16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
RTN3P1-201ENST00000536295 SORBS3O60504 671 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 MMP3P08254 477 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 KIF5BP33176 963 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms