RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 EXT2Q93063 718 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 ATP6V1E2Q96A05 226 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 ANGPTL3Q9Y5C1 460 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 F5H423 210 aaPredicted RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 GNGT2O14610 69 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 UBE2SQ16763 222 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 ZSWIM6Q9HCJ5 1215 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 MOSPD1Q9UJG1 213 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 PCCAP05165 728 aaPredicted RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 SLFNL1Q499Z3 407 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 FGD4Q96M96 766 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 NRBP1Q9UHY1 535 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 BAG5Q9UL15 447 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 TNFAIP1Q13829 316 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 ANGPTL8Q6UXH0 198 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 DPP9Q86TI2 863 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 PIGSQ96S52 555 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 LCORLQ8N3X6 602 aa13.77□□□□□ -0.2
SPG11-203ENST00000535302 ITM2BQ9Y287 266 aa13.77□□□□□ -0.2
SPG11-203ENST00000535302 RASSF2P50749 326 aa13.77□□□□□ -0.2
SPG11-203ENST00000535302 HVCN1Q96D96 273 aa13.77□□□□□ -0.2
SPG11-203ENST00000535302 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.2
SPG11-203ENST00000535302 SOS2Q07890 1332 aaPredicted RBP13.77□□□□□ -0.2
SPG11-203ENST00000535302 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPG11-203ENST00000535302 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 ZNF577Q9BSK1 485 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 ANAPC5Q9UJX4 755 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 PTPRTO14522 1441 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 PPP2R5BQ15173 497 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 LRGUKQ96M69 825 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 LIG3P49916 1009 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 ZNF445P59923 1031 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 CCDC84Q86UT8 332 aaPredicted RBP13.77□□□□□ -0.21
SPG11-203ENST00000535302 RFX6Q8HWS3 928 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 TBK1Q9UHD2 729 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
SPG11-203ENST00000535302 GNA14O95837 355 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 EEF1GP26641 437 aaKnown RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 MESDQ14696 234 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 FBXW4P57775 412 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 MYL7Q01449 175 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 GANCQ8TET4 914 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 ZKSCAN8Q15776 578 aaPredicted RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 HACD3Q9P035 362 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 LRRN2O75325 713 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 GCKP35557 465 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 IRX4P78413 519 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 OR8K1Q8NGG5 319 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 CFAP36Q96G28 342 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 LSG1Q9H089 658 aaKnown RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 PUS7LQ9H0K6 701 aaKnown RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 KRT82Q9NSB4 513 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 PDE8BO95263 885 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 XPAP23025 273 aaPredicted RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 CXCR5P32302 372 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 EHHADHQ08426 723 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 PIP4K2CQ8TBX8 421 aa13.76□□□□□ -0.21
SPG11-203ENST00000535302 ABTB1Q969K4 478 aaPredicted RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
SPG11-203ENST00000535302 SERPINB2P05120 415 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 MARK3P27448 753 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 YWHAGP61981 247 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG11-203ENST00000535302 TRIP13Q15645 432 aaPredicted RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 TRMT10CQ7L0Y3 403 aaKnown RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 CASP14P31944 242 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 HACE1Q8IYU2 909 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 ZNF148Q9UQR1 794 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 BLVRAP53004 296 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 GDAP1Q8TB36 358 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 DNAJC17Q9NVM6 304 aaKnown RBP13.75□□□□□ -0.21
SPG11-203ENST00000535302 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
SPG11-203ENST00000535302 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms