RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CNNM3Q8NE01 707 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 RBSNQ9H1K0 784 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TECP42680 631 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 OAZ1P54368 228 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 UBXN2AP68543 259 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MOXD1Q6UVY6 613 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MCF2L2Q86YR7 1114 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 HAS1Q92839 578 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 GJA10Q969M2 543 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MBOAT7Q96N66 472 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 NAP1L4Q99733 375 aaKnown RBP23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 SERTAD1Q9UHV2 236 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 PNMA2Q9UL42 364 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FAM86B1E9PN63 330 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FAM86B2P0C5J1 330 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 GHRHRQ02643 423 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 DHX58Q96C10 678 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 UIMC1Q96RL1 719 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 GRPEL1Q9HAV7 217 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 RNF146Q9NTX7 359 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 A0A0G2JMZ2 1700 aa23■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ATP2A1O14983 1001 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ACTN4O43707 911 aaKnown RBP22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 PEX10O60683 326 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CCDC192P0DO97 292 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FKBP1BP68106 108 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TYRO3Q06418 890 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TEX13BQ9BXU2 312 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 AGTPBP1Q9UPW5 1226 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 UNCXA6NJT0 531 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FOXN1O15353 648 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CYP3A4P08684 503 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 PLS1Q14651 629 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 PRR16Q569H4 304 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 IGSF22Q8N9C0 903 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 LENG9Q96B70 501 aa22.99■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ITGBL1O95965 494 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CIITAP33076 1130 aa22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 RPS6P62753 249 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 SLC30A10Q6XR72 485 aa22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 C2orf69Q8N8R5 385 aa22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CYP2W1Q8TAV3 490 aa22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ASCC2Q9H1I8 757 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 KCNMB3Q9NPA1 279 aa22.98■■□□□ 1.27
TNFRSF1A-205ENST00000534885 A0A087WWV3 80 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 IRX3P78415 501 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 SNAPC2Q13487 334 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 PNOCQ13519 176 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CST9Q5W186 159 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 SASS6Q6UVJ0 657 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 NSMFQ6X4W1 530 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 LBX2Q6XYB7 198 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 RNF214Q8ND24 703 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 SYTL5Q8TDW5 730 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TTC12Q9H892 705 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 KIAA1468Q9P260 1216 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 STAT3P40763 770 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FXR2P51116 673 aaKnown RBP eCLIP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 KARSQ15046 597 aaKnown RBP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 E2F4Q16254 413 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 GPAT2Q6NUI2 795 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 FASTKD5Q7L8L6 764 aaKnown RBP22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 AK8Q96MA6 479 aa22.97■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TXLNAP40222 546 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 Q4G0T1 1027 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CHADLQ6NUI6 762 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 GRAMD1CQ8IYS0 662 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ZFP91Q96JP5 570 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 EHMT1Q9H9B1 1298 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 BTBD7Q9P203 1132 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 POTEMA6NI47 508 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ZNF76P36508 570 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 UBA7P41226 1012 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MRE11P49959 708 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MDM2Q00987 491 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MKRN3Q13064 507 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 RNF207Q6ZRF8 634 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 ETNPPLQ8TBG4 499 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CCSER1Q9C0I3 900 aa22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 MAP3K20Q9NYL2 800 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-205ENST00000534885 TRPM7Q96QT4 1865 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 IGLV3-22A0A075B6J6 115 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MARCH6O60337 910 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 HERVK_113P62684 666 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TMEM266Q2M3C6 531 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PURBQ96QR8 312 aaKnown RBP22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RPTORQ8N122 1335 aa22.95■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SLFN14P0C7P3 912 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TAAR1Q96RJ0 339 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MMTAG2Q9BU76 263 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 DISC1Q9NRI5 854 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PCDHA12Q9UN75 941 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PRR29P0C7W0 189 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 XRCC6P12956 609 aaKnown RBP eCLIP22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 BAATQ14032 418 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 POSTNQ15063 836 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 ZRSR1Q15695 479 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CABP7Q86V35 215 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 ELOA2Q8IYF1 753 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SAMD3Q8N6K7 520 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms