RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 WNT8AQ9H1J5 351 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 GNEQ9Y223 722 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 MYH6P13533 1939 aa11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 FRMPD2Q68DX3 1309 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-203ENST00000534830 TTLL4Q14679 1199 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 TAPT1Q6NXT6 567 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 CXCL17Q6UXB2 119 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 CLEC4DQ8WXI8 215 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 NOC4LQ9BVI4 516 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 DIAPH3Q9NSV4 1193 aa11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-203ENST00000534830 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 B4GALT4O60513 344 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 CCDC178Q5BJE1 867 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 TTC22Q5TAA0 569 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 GJD3Q8N144 294 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 ZKSCAN3Q9BRR0 538 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 WDR19Q8NEZ3 1342 aa11.81□□□□□ -0.52
CLSTN3-203ENST00000534830 NFIBO00712 420 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 KDM4AO75164 1064 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 TNFAIP2Q03169 654 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 TAP1Q03518 808 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 GRB10Q13322 594 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 BAATQ14032 418 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 IQSEC1Q6DN90 963 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 FBXL18Q96ME1 805 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 Q9Y3F1 56 aa11.8□□□□□ -0.52
CLSTN3-203ENST00000534830 WDFY4Q6ZS81 3184 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 B4E1Z4 1266 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 CABYRO75952 493 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ACTN1P12814 892 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ALADP13716 330 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 SMPD1P17405 629 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 TMEM63BQ5T3F8 832 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ENAHQ8N8S7 591 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 VWCEQ96DN2 955 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 MAF1Q9H063 256 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 VTA1Q9NP79 307 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 RAD50Q92878 1312 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
CLSTN3-203ENST00000534830 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 ZEB2O60315 1214 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 PFKMP08237 780 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 GOLGA8HP0CJ92 632 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 PTGS1P23219 599 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 EDNRBP24530 442 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 CHMLP26374 656 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 PSMC6P62333 389 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 SEC23AQ15436 765 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 FSCN1Q16658 493 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 TLK2Q86UE8 772 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 KRT23Q9C075 422 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 ADD3Q9UEY8 706 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-203ENST00000534830 PTPDC1A2A3K4 754 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 LPXNO60711 386 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 CYP2C9P11712 490 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 PTH1RQ03431 593 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 DUSP28Q4G0W2 176 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 SPRED2Q7Z698 418 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 ADGRF4Q8IZF3 695 aa11.77□□□□□ -0.53
CLSTN3-203ENST00000534830 DNERQ8NFT8 737 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms