RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 MYO1BO43795 1136 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 RAPGEF3O95398 923 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 PNLIPP16233 465 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
CASP4-213ENST00000534356 TKFCQ3LXA3 575 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 MAMDC2Q7Z304 686 aaPredicted RBP9.41□□□□□ -0.9
CASP4-213ENST00000534356 SLC7A14Q8TBB6 771 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 MARCH2Q9P0N8 246 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 NDOR1Q9UHB4 597 aa9.41□□□□□ -0.9
CASP4-213ENST00000534356 CARMIL2Q6F5E8 1435 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 FUCA1P04066 466 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 GLI1P08151 1106 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 JUNBP17275 347 aaPredicted RBP9.4□□□□□ -0.9
CASP4-213ENST00000534356 GPR85P60893 370 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 NLRP10Q86W26 655 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 IFNL3Q8IZI9 196 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 FAM168AQ92567 244 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 ZFYVE21Q9BQ24 234 aa9.4□□□□□ -0.9
CASP4-213ENST00000534356 MRPL4Q9BYD3 311 aaKnown RBP9.4□□□□□ -0.9
CASP4-213ENST00000534356 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 PLD2O14939 933 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 TAL1P17542 331 aaPredicted RBP9.39□□□□□ -0.91
CASP4-213ENST00000534356 LSAMPQ13449 338 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 TCEA2Q15560 299 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 TRIM61Q5EBN2 209 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 LBX2Q6XYB7 198 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 CEP68Q76N32 757 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 GSTCDQ8NEC7 633 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 PLEKHO2Q8TD55 490 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.39□□□□□ -0.91
CASP4-213ENST00000534356 SFMBT1Q9UHJ3 866 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 CD2APQ9Y5K6 639 aa9.39□□□□□ -0.91
CASP4-213ENST00000534356 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.38□□□□□ -0.91
CASP4-213ENST00000534356 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.38□□□□□ -0.91
CASP4-213ENST00000534356 AQP7O14520 342 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 SDHBP21912 280 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 FPR2P25090 351 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 GTF2A2P52657 109 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 BICRALQ6AI39 1079 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASP4-213ENST00000534356 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
CASP4-213ENST00000534356 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
CASP4-213ENST00000534356 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
CASP4-213ENST00000534356 A0A1W2PQJ5 194 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 C22orf46C9J442 243 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 KCNQ2O43526 872 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 HSD3B2P26439 372 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 ARL4AP40617 200 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 TMEM169Q96HH4 297 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 TNFRSF12AQ9NP84 129 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 CLDND1Q9NY35 253 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 PCDHA9Q9Y5H5 950 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
CASP4-213ENST00000534356 EFCAB14O75071 495 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 CRTAMO95727 393 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 ERVFRD-1P60508 538 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 FNDC3BQ53EP0 1204 aaKnown RBP9.36□□□□□ -0.91
CASP4-213ENST00000534356 PLEKHG4Q58EX7 1191 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 ADGRF1Q5T601 910 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 KIAA0907Q7Z7F0 614 aaPredicted RBP9.36□□□□□ -0.91
CASP4-213ENST00000534356 Q8N1Y9 231 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 TRMT2BQ96GJ1 504 aaKnown RBP9.36□□□□□ -0.91
CASP4-213ENST00000534356 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
CASP4-213ENST00000534356 SCLYQ96I15 445 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 SLC6A17Q9H1V8 727 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 TRIM39Q9HCM9 518 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 NACADO15069 1562 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 CADPSQ9ULU8 1353 aa9.36□□□□□ -0.91
CASP4-213ENST00000534356 GLI4P10075 376 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 GUCY1A3Q02108 690 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 PABPC4Q13310 644 aaKnown RBP eCLIP9.35□□□□□ -0.91
CASP4-213ENST00000534356 KIZQ2M2Z5 673 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 FGD2Q7Z6J4 655 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 MTDHQ86UE4 582 aaKnown RBP9.35□□□□□ -0.91
CASP4-213ENST00000534356 FEZ1Q99689 392 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 BICRAQ9NZM4 1560 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.35□□□□□ -0.91
CASP4-213ENST00000534356 X6R8D5 127 aa9.35□□□□□ -0.91
CASP4-213ENST00000534356 H7BY64 318 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 RFPL3O75679 317 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 RASGRP1O95267 797 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 NTRK1P04629 796 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 DBHP09172 617 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 PDE6BP35913 854 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 JAM3Q9BX67 310 aa9.34□□□□□ -0.91
CASP4-213ENST00000534356 SOD2P04179 222 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 GRK2P25098 689 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 GRK3P35626 688 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 MPZL3Q6UWV2 235 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms