RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 PLS3P13797 630 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 PRKCAP17252 672 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 PAMP19021 973 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 L1CAMP32004 1257 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 GFRA1P56159 465 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 TESK1Q15569 626 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 DENND5AQ6IQ26 1287 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 PRR23BQ6ZRT6 265 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 FERMT3Q86UX7 667 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 CPNE8Q86YQ8 564 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 KSR1Q8IVT5 923 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 SIRT2Q8IXJ6 389 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 C1orf159Q96HA4 380 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 INTS4Q96HW7 963 aaKnown RBP5.41□□□□□ -1.54
HIPK3-206ENST00000534262 SPATA9Q9BWV2 254 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 CLEC1BQ9P126 229 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 IMPACTQ9P2X3 320 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 EID1Q9Y6B2 187 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 TAF6LQ9Y6J9 622 aa5.41□□□□□ -1.54
HIPK3-206ENST00000534262 TRBV23OR9-2A0A075B6M9 112 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 NPHP3-ACAD11A0A0J9YXS1 232 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 C7orf72A4D263 438 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 RFPL3O75679 317 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 ASMTLO95671 621 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 CPP00450 1065 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 SNRPB2P08579 225 aaKnown RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 CORO7P57737 925 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 CYP4F8P98187 520 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 HSP90AA2PQ14568 343 aaPredicted RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 TAF7LQ5H9L4 462 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 SLC35F1Q5T1Q4 408 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 MBLAC2Q68D91 279 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 IQCEQ6IPM2 695 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 RNF180Q86T96 592 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 IRF2BP1Q8IU81 584 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 SMC5Q8IY18 1101 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 RAVER1Q8IY67 606 aaKnown RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 LRRC47Q8N1G4 583 aaKnown RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 TMEM145Q8NBT3 493 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 PMM1Q92871 262 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 NINJ1Q92982 152 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 SLC6A17Q9H1V8 727 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 MYH16Q9H6N6 1097 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 HOMER2Q9NSB8 354 aa5.4□□□□□ -1.54
HIPK3-206ENST00000534262 TMEFF2Q9UIK5 374 aaPredicted RBP5.4□□□□□ -1.54
HIPK3-206ENST00000534262 TTBK1Q5TCY1 1321 aaPredicted RBP5.4□□□□□ -1.55
HIPK3-206ENST00000534262 KDM2BQ8NHM5 1336 aa5.4□□□□□ -1.55
HIPK3-206ENST00000534262 LRRC10BA6NIK2 292 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 DLX3O60479 287 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 FGFR1P11362 822 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 PMLP29590 882 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 ECI1P42126 302 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 ERVFRD-1P60508 538 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 MESP2Q0VG99 397 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 NFE2Q16621 373 aaPredicted RBP5.39□□□□□ -1.55
HIPK3-206ENST00000534262 MLANAQ16655 118 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 PRSS53Q2L4Q9 553 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 ACBD5Q5T8D3 534 aaPredicted RBP5.39□□□□□ -1.55
HIPK3-206ENST00000534262 E4F1Q66K89 784 aaPredicted RBP5.39□□□□□ -1.55
HIPK3-206ENST00000534262 OGFOD2Q6N063 350 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 MPZL3Q6UWV2 235 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 CCDC103Q8IW40 242 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 EXOC8Q8IYI6 725 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 ZSWIM2Q8NEG5 633 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 NUP43Q8NFH3 380 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 DPF3Q92784 378 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 MFSD3Q96ES6 412 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
HIPK3-206ENST00000534262 PDLIM7Q9NR12 457 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 NPFFR2Q9Y5X5 522 aa5.39□□□□□ -1.55
HIPK3-206ENST00000534262 GSG1L2A8MUP6 293 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 PEX14O75381 377 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 FAM153BP0C7A2 387 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 SSRP1Q08945 709 aaKnown RBP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 INF2Q27J81 1249 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 ZC3H12BQ5HYM0 836 aaKnown RBP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 DDX42Q86XP3 938 aaKnown RBP eCLIP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 AFAP1L2Q8N4X5 818 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 KISS1RQ969F8 398 aaPredicted RBP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 OSBP2Q969R2 916 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 MTA3Q9BTC8 594 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 AARSD1Q9BTE6 412 aaKnown RBP5.38□□□□□ -1.55
HIPK3-206ENST00000534262 KCNK12Q9HB15 430 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 TNFRSF12AQ9NP84 129 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 PFDN2Q9UHV9 154 aa5.38□□□□□ -1.55
HIPK3-206ENST00000534262 A0A1W2PQ27 194 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 A0A1W2PQ64 194 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 A0A1W2PQC6 194 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 FAM83GA6ND36 823 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 PABPC1P11940 636 aaKnown RBP5.37□□□□□ -1.55
HIPK3-206ENST00000534262 ARL4AP40617 200 aa5.37□□□□□ -1.55
HIPK3-206ENST00000534262 KCNJ6P48051 423 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms