RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 MKI67P46013 3256 aaKnown RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 H0YGN5 161 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 OPLAHO14841 1288 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 ZEB2O60315 1214 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 SMPD1P17405 629 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 EDNRBP24530 442 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 ANAPC15P60006 121 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 TAPT1Q6NXT6 567 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 FBXL16Q8N461 479 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 TSEN34Q9BSV6 310 aaKnown RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 PXMP2Q9NR77 195 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 PHF24Q9UPV7 400 aa15.42■□□□□ 0.06
CAPN1-227ENST00000533909 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-227ENST00000533909 MOXD2PA6NHM9 499 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 DYNC1LI2O43237 492 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-227ENST00000533909 ACLYP53396 1101 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 NAPAP54920 295 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 GJA9P57773 515 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 GHRHRQ02643 423 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 TTLL4Q14679 1199 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 KCNA10Q16322 511 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 GPKOWQ92917 476 aaPredicted RBP eCLIP15.41■□□□□ 0.06
CAPN1-227ENST00000533909 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
CAPN1-227ENST00000533909 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 LCTP09848 1927 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
CAPN1-227ENST00000533909 A0A1W2PQ45 241 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 A0A1W2PQY0 241 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 CPLX1O14810 134 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 NKRFO15226 690 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 ADCY6O43306 1168 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 NR3C2P08235 984 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 TXNP10599 105 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 CDC27P30260 824 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 CCND2P30279 289 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 LRRC26Q2I0M4 334 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 CPLX2Q6PUV4 134 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 GLT1D1Q96MS3 346 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 AGXT2Q9BYV1 514 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 STARD7Q9NQZ5 370 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 RBM27Q9P2N5 1060 aaKnown RBP15.4■□□□□ 0.06
CAPN1-227ENST00000533909 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 Q9Y3F1 56 aa15.4■□□□□ 0.06
CAPN1-227ENST00000533909 MYADML2A6NDP7 307 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 SPDYE3A6NKU9 549 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-227ENST00000533909 CPT1AP50416 773 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
CAPN1-227ENST00000533909 BEX3Q00994 111 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 PPP1R18Q6NYC8 613 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 SLC39A5Q6ZMH5 540 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 PDCD2LQ9BRP1 358 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.05
CAPN1-227ENST00000533909 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
CAPN1-227ENST00000533909 RBM47A0AV96 593 aaKnown RBP15.38■□□□□ 0.05
CAPN1-227ENST00000533909 ASGR1P07306 291 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CAPN1-227ENST00000533909 RTP1P59025 263 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 STK3Q13188 491 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-227ENST00000533909 PGM5Q15124 567 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
CAPN1-227ENST00000533909 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-227ENST00000533909 ZMYND8Q9ULU4 1186 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-227ENST00000533909 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 CABYRO75952 493 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 ADCY7P51828 1080 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 FUT2Q10981 343 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 VSIG10LQ86VR7 867 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 PHKBQ93100 1093 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-227ENST00000533909 LARP6Q9BRS8 491 aaKnown RBP15.37■□□□□ 0.05
CAPN1-227ENST00000533909 SLC26A6Q9BXS9 759 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 GLT8D2Q9H1C3 349 aa15.37■□□□□ 0.05
CAPN1-227ENST00000533909 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
CAPN1-227ENST00000533909 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
CAPN1-227ENST00000533909 PRDM5Q9NQX1 630 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms