RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 L1RE1Q9UN81 338 aa8.04□□□□□ -1.12
RNPC3-209ENST00000533834 MGAMO43451 1857 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 CNTNAP1P78357 1384 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 PJA2O43164 708 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SLC12A3P55017 1021 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 KIAA1755Q5JYT7 1200 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 KRT25Q7Z3Z0 450 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SRGAP1Q7Z6B7 1085 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 COA1Q9GZY4 146 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 TAB2Q9NYJ8 693 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 MYH10P35580 1976 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 ATP8B3O60423 1300 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 PDE2AO00408 941 aaPredicted RBP8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SEC31AO94979 1220 aaKnown RBP8.03□□□□□ -1.12
RNPC3-209ENST00000533834 NDUFA10O95299 355 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 NFIAQ12857 509 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SLC4A8Q2Y0W8 1093 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 NEK8Q86SG6 692 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 CNGA4Q8IV77 575 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 RAD54LQ92698 747 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 P2RX5Q93086 422 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 SYT11Q9BT88 431 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 STRA6Q9BX79 667 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 DEFB129Q9H1M3 183 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 CDC23Q9UJX2 597 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 VAV3Q9UKW4 847 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 ZSWIM8A7E2V4 1837 aa8.03□□□□□ -1.12
RNPC3-209ENST00000533834 PVALEFA0A1B0GWK0 134 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 SLC26A4O43511 780 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 UFL1O94874 794 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 TSPY3P0CV98 308 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 TSPY8P0CW00 308 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 ASPRV1Q53RT3 343 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 DACT2Q5SW24 774 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 BTNL9Q6UXG8 535 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 TMTC1Q8IUR5 882 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 CCDC148Q8NFR7 591 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 RMND1Q9NWS8 449 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 GGA1Q9UJY5 639 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 PLAGL2Q9UPG8 496 aa8.02□□□□□ -1.12
RNPC3-209ENST00000533834 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 SMCO2A6NFE2 343 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 EIF3CLB5ME19 914 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 CYP2C19P33261 490 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 TXLNAP40222 546 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 CCT6AP40227 531 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 PPP2R3AQ06190 1150 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 TTBK2Q6IQ55 1244 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 DTHD1Q6ZMT9 781 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 COL23A1Q86Y22 540 aaPredicted RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 SLC35F6Q8N357 371 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 NOA1Q8NC60 698 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 EIF3CQ99613 913 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 CCDC175P0C221 793 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 GHRHRQ02643 423 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 GNL2Q13823 731 aaKnown RBP8.02□□□□□ -1.13
RNPC3-209ENST00000533834 MFSD14BQ5SR56 506 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 RRAGBQ5VZM2 374 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 MOXD1Q6UVY6 613 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 ARHGAP27Q6ZUM4 889 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 UNC13DQ70J99 1090 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 CABP7Q86V35 215 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 TBC1D22AQ8WUA7 517 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 TOMM22Q9NS69 142 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 SWAP70Q9UH65 585 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 KIAA1217Q5T5P2 1943 aa8.02□□□□□ -1.13
RNPC3-209ENST00000533834 PRPF6O94906 941 aaKnown RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 BAG3O95817 575 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 RFC4P35249 363 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 MAP3K10Q02779 954 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 NONOQ15233 471 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 CREG2Q8IUH2 290 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 GMCL1P1Q8NEA9 526 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 NGLY1Q96IV0 654 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 STK17AQ9UEE5 414 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 TTF2Q9UNY4 1162 aaKnown RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 PNMA6FA0A0J9YX94 578 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 DDTLA6NHG4 134 aaPredicted RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 PLSCR1O15162 318 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 PLEKP08567 350 aaPredicted RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 MYBP10242 640 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 HOXA7P31268 230 aaPredicted RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 STAT6P42226 847 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 Q4G0T1 1027 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 CYP26C1Q6V0L0 522 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 TEX11Q8IYF3 940 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 GUF1Q8N442 669 aaKnown RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 NOC3LQ8WTT2 800 aaKnown RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 ZNF592Q92610 1267 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 ZBED3Q96IU2 234 aaPredicted RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 VPS16Q9H269 839 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms