RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 BICDL2A1A5D9 508 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 NDUFA10O95299 355 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 COBLL1Q53SF7 1204 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 CENPPQ6IPU0 288 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 PPP1R18Q6NYC8 613 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 CNNM4Q6P4Q7 775 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 SNX29Q8TEQ0 813 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 ZDHHC15Q96MV8 337 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 EHD4Q9H223 541 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 TRIM10Q9UDY6 481 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L15C9J2P7 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L13C9JLJ4 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L11C9JVI0 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L18D6R9N7 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L22D6RA61 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L17D6RBQ6 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L19D6RCP7 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L20D6RJB6 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 RAD21O60216 631 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L24Q0WX57 530 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 TEX35Q5T0J7 233 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 USP17L6PQ6QN14 398 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 RAD54LQ92698 747 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 CUL5Q93034 780 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 ZSWIM4Q9H7M6 989 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 PSTPIP2Q9H939 334 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 FAM198AQ9UFP1 575 aa17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 DDX25Q9UHL0 483 aaKnown RBP17.14■□□□□ 0.33
CACNA1E-208ENST00000533229 ZRANB2O95218 330 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 GLIS3Q8NEA6 775 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 CDK5RAP3Q96JB5 506 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
CACNA1E-208ENST00000533229 MRPL12P52815 198 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 TMEM119Q4V9L6 283 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 DDX12PQ92771 950 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 SEC31AO94979 1220 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 MTIF2P46199 727 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 CDC23Q9UJX2 597 aa17.12■□□□□ 0.33
CACNA1E-208ENST00000533229 TRIM21P19474 475 aaKnown RBP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 EHHADHQ08426 723 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 MEA1Q16626 185 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 ST7Q9NRC1 585 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 APBA3O96018 575 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 PNMA6AP0CW24 399 aaPredicted RBP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 IDEP14735 1019 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 PPP1R2P41236 205 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 SLC1A4P43007 532 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 HERVK_113P62684 666 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 MKL1Q969V6 931 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 PARD6BQ9BYG5 372 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
CACNA1E-208ENST00000533229 PLSCR1O15162 318 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 BMS1Q14692 1282 aaKnown RBP17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 SEPT2Q15019 361 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 LRRC41Q15345 812 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 FAM114A1Q8IWE2 563 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 IDI2Q9BXS1 227 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 GUCA1BQ9UMX6 200 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
CACNA1E-208ENST00000533229 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms