RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
SSBP3-214ENST00000533209 DDX20Q9UHI6 824 aaKnown RBP13.8□□□□□ -0.2
SSBP3-214ENST00000533209 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-214ENST00000533209 MSCO60682 206 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 DTNBO60941 627 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
SSBP3-214ENST00000533209 PDE4DQ08499 809 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 UBE2SQ16763 222 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 ARHGEF16Q5VV41 709 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 TAPT1Q6NXT6 567 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 FBXO16Q8IX29 292 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-214ENST00000533209 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 CUL5Q93034 780 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 IWS1Q96ST2 819 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 OGDHLQ9ULD0 1010 aa13.79□□□□□ -0.2
SSBP3-214ENST00000533209 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
SSBP3-214ENST00000533209 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 B4DLN1 442 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 ADCY6O43306 1168 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 CDKL5O76039 1030 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 DEXIO95424 95 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
SSBP3-214ENST00000533209 NR3C2P08235 984 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 AKR1A1P14550 325 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 CAPN2P17655 700 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 ADCY7P51828 1080 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 MRPL12P52815 198 aaKnown RBP13.78□□□□□ -0.2
SSBP3-214ENST00000533209 EEPD1Q7L9B9 569 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 IL31RAQ8NI17 732 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-214ENST00000533209 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
SSBP3-214ENST00000533209 FAM184BQ9ULE4 1060 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
SSBP3-214ENST00000533209 ESYT2A0FGR8 921 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 ST18O60284 1047 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
SSBP3-214ENST00000533209 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 RGS19P49795 217 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-214ENST00000533209 PGM5Q15124 567 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 STXBP2Q15833 593 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 NSUN7Q8NE18 718 aaKnown RBP13.77□□□□□ -0.21
SSBP3-214ENST00000533209 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-214ENST00000533209 LENG1Q96BZ8 264 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-214ENST00000533209 AIFM3Q96NN9 605 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 STK36Q9NRP7 1315 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
SSBP3-214ENST00000533209 MCM3APO60318 1980 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 LRRC37A2A6NM11 1700 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-214ENST00000533209 RBM47A0AV96 593 aaKnown RBP13.76□□□□□ -0.21
SSBP3-214ENST00000533209 RARBP10826 455 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
SSBP3-214ENST00000533209 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
SSBP3-214ENST00000533209 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-214ENST00000533209 ORC3Q9UBD5 711 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-214ENST00000533209 JAK2O60674 1132 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 DUSP11O75319 330 aaKnown RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 EIF3JO75822 258 aaKnown RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 RGS20O76081 388 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 SMPD1P17405 629 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 CCDC148Q8NFR7 591 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 C6orf50Q9HD87 102 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 PCDHA6Q9UN73 950 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
SSBP3-214ENST00000533209 PCDHA8Q9Y5H6 950 aa13.75□□□□□ -0.21
SSBP3-214ENST00000533209 SYNRGQ9UMZ2 1314 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 ARIH2O95376 493 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 PGK1P00558 417 aa13.74□□□□□ -0.21
SSBP3-214ENST00000533209 FOSP01100 380 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-214ENST00000533209 PTGS1P23219 599 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms