RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 SLC9A7Q96T83 725 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 LSG1Q9H089 658 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 KAT14Q9H8E8 782 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 RIPK3Q9Y572 518 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 TNKSO95271 1327 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 E7EWF7 191 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 CDC45O75419 566 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 PGK2P07205 417 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ZNF543Q08ER8 600 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 RALYLQ86SE5 291 aaKnown RBP11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 NCOA7Q8NI08 942 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ARNTL2Q8WYA1 636 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ABHD16BQ9H3Z7 469 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ANO2Q9NQ90 1003 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 FAM50BQ9Y247 325 aa11.9□□□□□ -0.5
CHMP4A-206ENST00000533011 ZNFX1Q9P2E3 1918 aaKnown RBP11.9□□□□□ -0.51
CHMP4A-206ENST00000533011 ZNF536O15090 1300 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 FRMPD2Q68DX3 1309 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 SLC16A2P36021 539 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 PTPN5P54829 565 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 TAP1Q03518 808 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 GRB10Q13322 594 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 GPATCH4Q5T3I0 446 aaKnown RBP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 IFIT1BQ5T764 474 aaKnown RBP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 CYB5R4Q7L1T6 521 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 NOC4LQ9BVI4 516 aaKnown RBP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 IRF2BPLQ9H1B7 796 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
CHMP4A-206ENST00000533011 ERICH2A1L162 156 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 ZEB2O60315 1214 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 SNAI1O95863 264 aaPredicted RBP11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 RFC2P35250 354 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 CCL23P55773 120 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 ACVR2BQ13705 512 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 SEC23AQ15436 765 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 STOX1Q6ZVD7 989 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 ANKRD35Q8N283 1001 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 AGBL1Q96MI9 1066 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 PRKAG3Q9UGI9 489 aa11.88□□□□□ -0.51
CHMP4A-206ENST00000533011 GBF1Q92538 1859 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 MYADML2A6NDP7 307 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 SLC27A2O14975 620 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ICAM1P05362 532 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 GOLGA8HP0CJ92 632 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ALAS1P13196 640 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 SNAP25P60880 206 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ASPRV1Q53RT3 343 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 LENG1Q96BZ8 264 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 TRERF1Q96PN7 1200 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 HOMER2Q9NSB8 354 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
CHMP4A-206ENST00000533011 ZDBF2Q9HCK1 2354 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 EPOPA6NHQ4 379 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 PARP1P09874 1014 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 CREB3L3Q68CJ9 461 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 KRT40Q6A162 431 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 CHST3Q7LGC8 479 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 ERMP1Q7Z2K6 904 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 BMP8AQ7Z5Y6 402 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 WNT8AQ9H1J5 351 aa11.86□□□□□ -0.51
CHMP4A-206ENST00000533011 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
CHMP4A-206ENST00000533011 LPXNO60711 386 aa11.85□□□□□ -0.51
CHMP4A-206ENST00000533011 MCM5P33992 734 aa11.85□□□□□ -0.51
CHMP4A-206ENST00000533011 ANTXR2P58335 489 aa11.85□□□□□ -0.51
CHMP4A-206ENST00000533011 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
CHMP4A-206ENST00000533011 WTAPQ15007 396 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms