RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MTIF3Q9H2K0 278 aaKnown RBP20■□□□□ 0.79
RPUSD4-207ENST00000532800 NKX2-4Q9H2Z4 354 aa20■□□□□ 0.79
RPUSD4-207ENST00000532800 KAT14Q9H8E8 782 aa20■□□□□ 0.79
RPUSD4-207ENST00000532800 YBX2Q9Y2T7 364 aaKnown RBP20■□□□□ 0.79
RPUSD4-207ENST00000532800 TANC1Q9C0D5 1861 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 NKRFO15226 690 aaKnown RBP eCLIP19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 RAB30Q15771 203 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 NBPF20Q3BBV1 942 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 FAM47CQ5HY64 1035 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 ANKS1AQ92625 1134 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 DSCC1Q9BVC3 393 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 GPHNQ9NQX3 736 aaPredicted RBP19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 ZSWIM5Q9P217 1185 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 COL20A1Q9P218 1284 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 MSRAQ9UJ68 235 aa19.99■□□□□ 0.79
RPUSD4-207ENST00000532800 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 TXNP10599 105 aaKnown RBP19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 RABGGTBP53611 331 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 QRICH1Q2TAL8 776 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 ASPRV1Q53RT3 343 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 CCDC178Q5BJE1 867 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 RGS22Q8NE09 1264 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 SYTL5Q8TDW5 730 aaPredicted RBP19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 TAAR1Q96RJ0 339 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 GAS2L1Q99501 681 aaPredicted RBP19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 PRDM6Q9NQX0 595 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 ABCB11O95342 1321 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 RAD50Q92878 1312 aa19.98■□□□□ 0.79
RPUSD4-207ENST00000532800 A6NJR5 290 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 HIP1O00291 1037 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 SUPT20HL2P0C7V6 817 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 ADGRE1Q14246 886 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 TTLL4Q14679 1199 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 IMMTQ16891 758 aaKnown RBP19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 BRDTQ58F21 947 aaPredicted RBP19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 DEFB128Q7Z7B8 93 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 RPUSD2Q8IZ73 545 aaKnown RBP19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 PPM1EQ8WY54 764 aa19.97■□□□□ 0.79
RPUSD4-207ENST00000532800 ZBBXA8MT70 800 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 DHX16O60231 1041 aaKnown RBP19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 MYOGP15173 224 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 NT5C2P49902 561 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 CCDC62Q6P9F0 684 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 JMJD4Q9H9V9 463 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 VAT1LQ9HCJ6 419 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 SLC4A7Q9Y6M7 1214 aa19.96■□□□□ 0.79
RPUSD4-207ENST00000532800 B4DLN1 442 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 PARP1P09874 1014 aaKnown RBP19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 MRPL12P52815 198 aaKnown RBP19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 CHMP4BP1P59074 171 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 LY6KQ17RY6 165 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 NFRKBQ6P4R8 1299 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 SEPT14Q6ZU15 432 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 FBXO11Q86XK2 927 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 STAG2Q8N3U4 1231 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 AFG1LQ8WV93 481 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 SLC28A3Q9HAS3 691 aa19.95■□□□□ 0.78
RPUSD4-207ENST00000532800 REV3LO60673 3130 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 KPNA6O60684 536 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 PDE4AP27815 886 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 ARHGAP1Q07960 439 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 NSUN6Q8TEA1 469 aaKnown RBP19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 RMDN3Q96TC7 470 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 UBAC1Q9BSL1 405 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 KRT23Q9C075 422 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 CTNNA3Q9UI47 895 aa19.94■□□□□ 0.78
RPUSD4-207ENST00000532800 TET1Q8NFU7 2136 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 TTC28Q96AY4 2481 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 PFKMP08237 780 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 MMP3P08254 477 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 ATP2A2P16615 1042 aaKnown RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 EIF2AK2P19525 551 aaKnown RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 IFIT1BQ5T764 474 aaKnown RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 CYB5R4Q7L1T6 521 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 MCF2L2Q86YR7 1114 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 MRPL11Q9Y3B7 192 aaKnown RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 TRIP12Q14669 1992 aaPredicted RBP19.93■□□□□ 0.78
RPUSD4-207ENST00000532800 OPLAHO14841 1288 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 GH1P01241 217 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 IGFBP4P22692 258 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 SEC23AQ15436 765 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 PPP2R2DQ66LE6 453 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 CHST3Q7LGC8 479 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 MAF1Q9H063 256 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 PCDHA11Q9Y5I1 949 aa19.92■□□□□ 0.78
RPUSD4-207ENST00000532800 PITPNM1O00562 1244 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 PPP1R11O60927 126 aaPredicted RBP19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 CFBP00751 764 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 IQCF3P0C7M6 154 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 PTPN11Q06124 597 aaPredicted RBP19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 STXBP2Q15833 593 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 CCDC85BQ15834 202 aaPredicted RBP19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 TJAP1Q5JTD0 557 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 ARHGEF16Q5VV41 709 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 KAT2BQ92831 832 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 CTAGE1Q96RT6 745 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 IWS1Q96ST2 819 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms