RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CCND2P30279 289 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CDC37Q16543 378 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 AP5M1Q9H0R1 490 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 SLC39A2Q9NP94 309 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 hCG_1984214I3L0E3 225 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ASNSP08243 561 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 LGSNQ5TDP6 509 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 SFMBT2Q5VUG0 894 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 KRBA2Q6ZNG9 492 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 FAM160B2Q86V87 743 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF713Q8N859 430 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 I3L4J1 428 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 GTPBP6O43824 516 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 MARCH10Q8NA82 808 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ATP6V0A1Q93050 837 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 LSM14BQ9BX40 385 aaKnown RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 RPAP1Q9BWH6 1393 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 ABL1P00519 1130 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RHOXF2BP0C7M4 288 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 CHRNA5P30532 468 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 YARSP54577 528 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 SNAP25P60880 206 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 MTX1Q13505 466 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 MCM6Q14566 821 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 ARMCX5Q6P1M9 558 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 CASC4Q6P4E1 433 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 UBL4BQ8N7F7 174 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RHOXF2Q9BQY4 288 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 SUDS3Q9H7L9 328 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 CEP170BQ9Y4F5 1589 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 LAD1O00515 517 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 TRAPPC10P48553 1259 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 NDUFA8P51970 172 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 MORC3Q14149 939 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 LONRF3Q496Y0 759 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 FAM170AA1A519 330 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 KCNJ18B7U540 433 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 TNNC2P02585 160 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 MAN1A1P33908 653 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 VAV2P52735 878 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 KCNJ12Q14500 433 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 UBE2SQ16763 222 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 C4orf50Q6ZRC1 276 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF365Q70YC5 407 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 CEP57Q86XR8 500 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RSRC1Q96IZ7 334 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 S100BP04271 92 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 RNASE9P60153 205 aaKnown RBP9.56□□□□□ -0.88
CTNND1-232ENST00000532649 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 CCDC62Q6P9F0 684 aa9.56□□□□□ -0.88
CTNND1-232ENST00000532649 DLATP10515 647 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 FAM196BA6NMK8 535 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MAGEA1P43355 309 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 FOXO4P98177 505 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ITKQ08881 620 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 RBBP5Q15291 538 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 RPS6KA2Q15349 733 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MIS18BP1Q6P0N0 1132 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 SP8Q8IXZ3 490 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ARFGAP2Q8N6H7 521 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 WHAMMQ8TF30 809 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 WRNIP1Q96S55 665 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ARMCX3Q9UH62 379 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 AKT3Q9Y243 479 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MMP1P03956 469 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 GCFC2P16383 781 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 SESTD1Q86VW0 696 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 TMTC1Q8IUR5 882 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 LINC00116Q8NCU8 138 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 SECISBP2LQ93073 1101 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MMS19Q96T76 1030 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MYO1AQ9UBC5 1043 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 IFNAR1P17181 557 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 NR5A1Q13285 461 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 TFDP1Q14186 410 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 R3HDM1Q15032 1099 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms