RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 PCDHAC2Q9Y5I4 1007 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 TCP10Q12799 353 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 MKL1Q969V6 931 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 NUDT12Q9BQG2 462 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 SLF1Q9BQI6 1058 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 SEMA6BQ9H3T3 888 aa26.33■■□□□ 1.81
SORL1-210ENST00000532451 SIPA1L1O43166 1804 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 APBA3O96018 575 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 GCFC2P16383 781 aaKnown RBP26.32■■□□□ 1.8
SORL1-210ENST00000532451 MTIF2P46199 727 aaKnown RBP26.32■■□□□ 1.8
SORL1-210ENST00000532451 CENPPQ6IPU0 288 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 HAS1Q92839 578 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 EEF2KMTQ96G04 330 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 IDI2Q9BXS1 227 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 ARGLU1Q9NWB6 273 aaPredicted RBP26.32■■□□□ 1.8
SORL1-210ENST00000532451 FAM53CQ9NYF3 392 aa26.32■■□□□ 1.8
SORL1-210ENST00000532451 ATF5Q9Y2D1 282 aaPredicted RBP26.32■■□□□ 1.8
SORL1-210ENST00000532451 DDTLA6NHG4 134 aaPredicted RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 EEF2P13639 858 aaKnown RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 ARHGAP25P42331 645 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 HDLBPQ00341 1268 aaKnown RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 DACT2Q5SW24 774 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 RSRC2Q7L4I2 434 aaKnown RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 DCAF4Q8WV16 495 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 NUP58Q9BVL2 599 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 NYAP2Q9P242 653 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 PI4KBQ9UBF8 816 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 FAM198AQ9UFP1 575 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 EPN1Q9Y6I3 576 aaPredicted RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 FAM196BA6NMK8 535 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 NDUFA10O95299 355 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 TBC1D8BQ0IIM8 1120 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 TSR1Q2NL82 804 aaKnown RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 CERKLQ49MI3 558 aaPredicted RBP26.31■■□□□ 1.8
SORL1-210ENST00000532451 MSL1Q68DK7 614 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 DYMQ7RTS9 669 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 C2CD5Q86YS7 1000 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 TTYH3Q9C0H2 523 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 LRRC27Q9C0I9 530 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 GLT8D2Q9H1C3 349 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 PRDM10Q9NQV6 1147 aa26.31■■□□□ 1.8
SORL1-210ENST00000532451 RBM5P52756 815 aaKnown RBP eCLIP26.3■■□□□ 1.8
SORL1-210ENST00000532451 QRICH1Q2TAL8 776 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 SLC35F6Q8N357 371 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 RETREG2Q8NC44 543 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 NAP1L4Q99733 375 aaKnown RBP26.3■■□□□ 1.8
SORL1-210ENST00000532451 KANSL2Q9H9L4 492 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 ECE2O60344 883 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 SLC1A4P43007 532 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 MIIPQ5JXC2 388 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 KCNK18Q7Z418 384 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 ZSCAN29Q8IWY8 852 aaPredicted RBP26.3■■□□□ 1.8
SORL1-210ENST00000532451 NOC4LQ9BVI4 516 aaKnown RBP26.3■■□□□ 1.8
SORL1-210ENST00000532451 MYO1AQ9UBC5 1043 aa26.3■■□□□ 1.8
SORL1-210ENST00000532451 ABL1P00519 1130 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 SHROOM1Q2M3G4 852 aaPredicted RBP26.29■■□□□ 1.8
SORL1-210ENST00000532451 SLFN13Q68D06 897 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 KRT222Q8N1A0 295 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 GPR161Q8N6U8 529 aaKnown RBP26.29■■□□□ 1.8
SORL1-210ENST00000532451 CTAGE9A4FU28 777 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 RAD21O60216 631 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 MARCH6O60337 910 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 HOXA7P31268 230 aaPredicted RBP26.29■■□□□ 1.8
SORL1-210ENST00000532451 TUBB2AQ13885 445 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 TEX35Q5T0J7 233 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 WDR59Q6PJI9 974 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 SH3BP5LQ7L8J4 393 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 GUF1Q8N442 669 aaKnown RBP26.29■■□□□ 1.8
SORL1-210ENST00000532451 GOLGA1Q92805 767 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 TUBB2BQ9BVA1 445 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 CDC23Q9UJX2 597 aa26.29■■□□□ 1.8
SORL1-210ENST00000532451 REXO2Q9Y3B8 237 aaKnown RBP26.29■■□□□ 1.8
SORL1-210ENST00000532451 RASSF10A6NK89 507 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 TRIM21P19474 475 aaKnown RBP26.28■■□□□ 1.8
SORL1-210ENST00000532451 ECM1Q16610 540 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 MEA1Q16626 185 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 STYK1Q6J9G0 422 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 DDX12PQ92771 950 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 TRIM34Q9BYJ4 488 aa26.28■■□□□ 1.8
SORL1-210ENST00000532451 MYH7BA7E2Y1 1941 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 NPM3O75607 178 aaKnown RBP26.27■■□□□ 1.8
SORL1-210ENST00000532451 BMS1Q14692 1282 aaKnown RBP26.27■■□□□ 1.8
SORL1-210ENST00000532451 KIF4BQ2VIQ3 1234 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 TATDN1Q6P1N9 297 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 ERGIC2Q96RQ1 377 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 PCDHA1Q9Y5I3 950 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 IDEP14735 1019 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 ZSCAN20P17040 1043 aaPredicted RBP26.27■■□□□ 1.8
SORL1-210ENST00000532451 KLK7P49862 253 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 EHHADHQ08426 723 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 CDC37Q16543 378 aaPredicted RBP26.27■■□□□ 1.8
SORL1-210ENST00000532451 RABGGTAQ92696 567 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 PCDHA12Q9UN75 941 aa26.27■■□□□ 1.8
SORL1-210ENST00000532451 USP17L15C9J2P7 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L13C9JLJ4 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L11C9JVI0 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L18D6R9N7 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L22D6RA61 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L17D6RBQ6 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L19D6RCP7 530 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms