RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PXMP2Q9NR77 195 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 DNM1LO00429 736 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 PGK1P00558 417 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 RARBP10826 455 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 SMPD1P17405 629 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 GJC2Q5T442 439 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 NECAB2Q7Z6G3 386 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 PDCD2LQ9BRP1 358 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 TPCN1Q9ULQ1 816 aa16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-220ENST00000532375 MYADML2A6NDP7 307 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 STXBP3O00186 592 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 RGS20O76081 388 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 NR3C2P08235 984 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 IFNAR1P17181 557 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 AK2P54819 239 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 GJA9P57773 515 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 USP17L6PQ6QN14 398 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 ARRDC4Q8NCT1 418 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 IL31RAQ8NI17 732 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.16
TSPAN4-220ENST00000532375 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 TNFAIP2Q03169 654 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 PDE4DQ08499 809 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 PHKBQ93100 1093 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
TSPAN4-220ENST00000532375 ADAMTS3O15072 1205 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PFKFB2O60825 505 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 ARIH2O95376 493 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 CST5P28325 142 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 NEK4P51957 841 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 SCRN1Q12765 414 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PGM5Q15124 567 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 DUSP28Q4G0W2 176 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 ARHGEF16Q5VV41 709 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 HEATR3Q7Z4Q2 680 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PSTPIP2Q9H939 334 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 PHF24Q9UPV7 400 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 Q9Y3F1 56 aa16.06■□□□□ 0.16
TSPAN4-220ENST00000532375 B4DLN1 442 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 LARGE1O95461 756 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 SCG2P13521 617 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 MRPS9P82933 396 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 STK3Q13188 491 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 STXBP2Q15833 593 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
TSPAN4-220ENST00000532375 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 UBE2SQ16763 222 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 ME3Q16798 604 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 RNF180Q86T96 592 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 MPHOSPH6Q99547 160 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 TSEN34Q9BSV6 310 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 MYH7BA7E2Y1 1941 aa16.04■□□□□ 0.16
TSPAN4-220ENST00000532375 SMCO2A6NFE2 343 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 NAPAP54920 295 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 ST3GAL1Q11201 340 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 SNX17Q15036 470 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 ANKRD1Q15327 319 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 KCNA10Q16322 511 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 COPS5Q92905 334 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms