RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 MPHOSPH6Q99547 160 aaKnown RBP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 CDH23Q9H251 3354 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 HIP1O00291 1037 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 ZNF213O14771 459 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 CSF2RAP15509 400 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 DNAJB2P25686 324 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 DSG2Q14126 1118 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 DUSP28Q4G0W2 176 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 CCDC178Q5BJE1 867 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 SLC30A10Q6XR72 485 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 MYLIPQ8WY64 445 aa17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
DEPDC7-204ENST00000532078 FOSL2P15408 326 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 PTGS1P23219 599 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 CALML3P27482 149 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 TMEM240Q5SV17 173 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 RNF207Q6ZRF8 634 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 DGKHQ86XP1 1220 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 PLPP6Q8IY26 295 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 CLEC4DQ8WXI8 215 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
DEPDC7-204ENST00000532078 PRUNE2Q8WUY3 3088 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 CYP2C18P33260 490 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 PDE4DQ08499 809 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 MTIF3Q9H2K0 278 aaKnown RBP17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 ZSWIM6Q9HCJ5 1215 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
DEPDC7-204ENST00000532078 GRIN2DO15399 1336 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 RAD50Q92878 1312 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 RBM47A0AV96 593 aaKnown RBP17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 B4DLN1 442 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 KDM4AO75164 1064 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 IGHDP01880 384 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 CPT1AP50416 773 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 RPS6P62753 249 aaKnown RBP17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 TMEM63BQ5T3F8 832 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 C16orf59Q7L2K0 433 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 DNERQ8NFT8 737 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 TIFAQ96CG3 184 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 ZKSCAN3Q9BRR0 538 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 IL23AQ9NPF7 189 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 CHD9Q3L8U1 2897 aa17.8■□□□□ 0.44
DEPDC7-204ENST00000532078 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 B4GALT4O60513 344 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 GOLGA8HP0CJ92 632 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 ACRP10323 421 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 EDNRBP24530 442 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 PSMC6P62333 389 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 USH1GQ495M9 461 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 BRDTQ58F21 947 aaPredicted RBP17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 OR6J1Q8NGC5 347 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 SCFD2Q8WU76 684 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 TRPV6Q9H1D0 765 aa17.79■□□□□ 0.44
DEPDC7-204ENST00000532078 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 PPP1R15BQ5SWA1 713 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 RGS22Q8NE09 1264 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 MAF1Q9H063 256 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
DEPDC7-204ENST00000532078 UMODL1Q5DID0 1318 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 B4E1Z4 1266 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 MYL3P08590 195 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 PURAQ00577 322 aaKnown RBP17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 GRIN2CQ14957 1233 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 MTG1Q9BT17 334 aaPredicted RBP17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
DEPDC7-204ENST00000532078 TNKSO95271 1327 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 ABCB11O95342 1321 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 FGBP02675 491 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 CCL23P55773 120 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 RAB30Q15771 203 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 ENAHQ8N8S7 591 aaPredicted RBP17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 PBX4Q9BYU1 374 aa17.76■□□□□ 0.43
DEPDC7-204ENST00000532078 KRT23Q9C075 422 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms