RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.041e-10■□□□□ 11.3
SF3B2-212ENST00000531589 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 HIPK3Q9H422 1215 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 PALM3A6NDB9 673 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-212ENST00000531589 A6NJR5 290 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 CFBP00751 764 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 PTGS1P23219 599 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 PSMC6P62333 389 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 TBC1D5Q92609 795 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 FAM161BQ96MY7 647 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-212ENST00000531589 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.04
SF3B2-212ENST00000531589 LCTP09848 1927 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 B4GALT4O60513 344 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 EIF3JO75822 258 aaKnown RBP15.26■□□□□ 0.03
SF3B2-212ENST00000531589 CYP2C18P33260 490 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 GRM4Q14833 912 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 SEPT14Q6ZU15 432 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 CATIPQ7Z7H3 387 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
SF3B2-212ENST00000531589 MTMR8Q96EF0 704 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 TRPV6Q9H1D0 765 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
SF3B2-212ENST00000531589 GH1P01241 217 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 HSD17B4P51659 736 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 GHRHRQ02643 423 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 PTPN11Q06124 597 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-212ENST00000531589 FAM47CQ5HY64 1035 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 TMEM67Q5HYA8 995 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 MTA3Q9BTC8 594 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 NOC4LQ9BVI4 516 aaKnown RBP15.25■□□□□ 0.03
SF3B2-212ENST00000531589 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 COL20A1Q9P218 1284 aa15.25■□□□□ 0.03
SF3B2-212ENST00000531589 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
SF3B2-212ENST00000531589 FGBP02675 491 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 NR3C2P08235 984 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 TROAPQ12815 778 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 CCDC62Q6P9F0 684 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 CDX2Q99626 313 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-212ENST00000531589 PXMP2Q9NR77 195 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 MRVI1Q9Y6F6 885 aa15.24■□□□□ 0.03
SF3B2-212ENST00000531589 PNMA6FA0A0J9YX94 578 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
SF3B2-212ENST00000531589 ARIH2O95376 493 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 ACRP10323 421 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 EIF2AK2P19525 551 aaKnown RBP15.23■□□□□ 0.03
SF3B2-212ENST00000531589 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
SF3B2-212ENST00000531589 KIF5BP33176 963 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 CCL23P55773 120 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 NBPF20Q3BBV1 942 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 RASIP1Q5U651 963 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 STOX1Q6ZVD7 989 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 CHST3Q7LGC8 479 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
SF3B2-212ENST00000531589 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 COPS5Q92905 334 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 PIGSQ96S52 555 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 NOD1Q9Y239 953 aa15.23■□□□□ 0.03
SF3B2-212ENST00000531589 PFKMP08237 780 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 DNAJB2P25686 324 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 MCM5P33992 734 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 LAMC2Q13753 1193 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 LY6KQ17RY6 165 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-212ENST00000531589 AFG1LQ8WV93 481 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 HERVK_113Q902F9 699 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
SF3B2-212ENST00000531589 TTYH1Q9H313 450 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-212ENST00000531589 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
SF3B2-212ENST00000531589 DDX41Q9UJV9 622 aaKnown RBP15.22■□□□□ 0.03
SF3B2-212ENST00000531589 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 OPLAHO14841 1288 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 PPP1R11O60927 126 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-212ENST00000531589 DDAH1O94760 285 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 MMP3P08254 477 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 MYCLP12524 364 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-212ENST00000531589 SMARCA1P28370 1054 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 GNAQP50148 359 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 ARHGAP1Q07960 439 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 BFSP2Q13515 415 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 DGKDQ16760 1214 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 CENPQQ7L2Z9 268 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-212ENST00000531589 VSIG10LQ86VR7 867 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms