RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NEK8Q86SG6 692 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 CEP19Q96LK0 163 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
LRRK1-207ENST00000531270 MFAP3P55082 362 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 YWHAHQ04917 246 aaPredicted RBP15.92■□□□□ 0.14
LRRK1-207ENST00000531270 ZSCAN26Q16670 478 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 NR1H4Q96RI1 486 aaPredicted RBP15.92■□□□□ 0.14
LRRK1-207ENST00000531270 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 KLRF2D3W0D1 207 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 CYP4F22Q6NT55 531 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 SMAP1Q8IYB5 467 aaPredicted RBP15.92■□□□□ 0.14
LRRK1-207ENST00000531270 PIP4K2CQ8TBX8 421 aa15.92■□□□□ 0.14
LRRK1-207ENST00000531270 SYF2O95926 243 aaKnown RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 BBOF1Q8ND07 529 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 TTC1Q99614 292 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 SUGT1Q9Y2Z0 365 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 ZSCAN20P17040 1043 aaPredicted RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 BAG6P46379 1132 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 ARHGDIAP52565 204 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 IL9RQ01113 521 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 BCAS4Q8TDM0 211 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 ABTB1Q969K4 478 aaPredicted RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 USP21Q9UK80 565 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 DARS2Q6PI48 645 aaKnown RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 ARHGEF18Q6ZSZ5 1173 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 CCDC124Q96CT7 223 aaKnown RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 MYO1FO00160 1098 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 RPN1P04843 607 aaKnown RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 BASP1P80723 227 aaKnown RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 EXOC3L4Q17RC7 722 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 TCP11X2Q5H9J9 407 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 IQCDQ96DY2 449 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 CDCA7Q9BWT1 371 aaPredicted RBP15.91■□□□□ 0.14
LRRK1-207ENST00000531270 TLK1Q9UKI8 766 aa15.91■□□□□ 0.14
LRRK1-207ENST00000531270 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 XPOTO43592 962 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 KRT1P04264 644 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 EEPD1Q7L9B9 569 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 PNMA1Q8ND90 353 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 RPGRIP1Q96KN7 1286 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 LARSQ9P2J5 1176 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 KIAA1024Q9UPX6 916 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 SGSM2O43147 1006 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 MAPK4P31152 587 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 BCAMP50895 628 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 TRIM67Q6ZTA4 783 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 FAM186BQ8IYM0 893 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 CCDC51Q96ER9 411 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 SLITRK6Q9H5Y7 841 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 INTUQ9ULD6 942 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 NCF2P19878 526 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 RPS8P62241 208 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 MAGOHBQ96A72 148 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 NXF1Q9UBU9 619 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 PPP2R2CQ9Y2T4 447 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 KRT10P13645 584 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 NT5C1BQ96P26 610 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 MMTAG2Q9BU76 263 aaKnown RBP15.9■□□□□ 0.14
LRRK1-207ENST00000531270 SLC52A2Q9HAB3 445 aa15.9■□□□□ 0.14
LRRK1-207ENST00000531270 WDR91A4D1P6 747 aa15.89■□□□□ 0.14
LRRK1-207ENST00000531270 MSH2P43246 934 aa15.89■□□□□ 0.14
LRRK1-207ENST00000531270 TFAMQ00059 246 aaKnown RBP15.89■□□□□ 0.14
LRRK1-207ENST00000531270 TBK1Q9UHD2 729 aa15.89■□□□□ 0.14
LRRK1-207ENST00000531270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.14
LRRK1-207ENST00000531270 GOLGA8QA0A0J9YX86 632 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 GOLGA8OA6NCC3 632 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 GOLGA8NF8WBI6 632 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 ESRRBO95718 433 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 NSUN2Q08J23 767 aaKnown RBP eCLIP15.89■□□□□ 0.13
LRRK1-207ENST00000531270 NOSTRINQ8IVI9 506 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 KCTD6Q8NC69 237 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 USP19O94966 1318 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 PNMA6EA0A0J9YXQ4 647 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 ATP2B4P23634 1241 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 TEKT2Q9UIF3 430 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 ZBTB7BO15156 539 aaPredicted RBP15.89■□□□□ 0.13
LRRK1-207ENST00000531270 LRRN2O75325 713 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 SNCBQ16143 134 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 ABCB5Q2M3G0 1257 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 INTS9Q9NV88 658 aaKnown RBP15.89■□□□□ 0.13
LRRK1-207ENST00000531270 ANXA13P27216 316 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
LRRK1-207ENST00000531270 AOC3Q16853 763 aa15.88■□□□□ 0.13
LRRK1-207ENST00000531270 LRCH2Q5VUJ6 765 aa15.88■□□□□ 0.13
LRRK1-207ENST00000531270 ZNF577Q9BSK1 485 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms