RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 MEA1Q16626 185 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 RNF220Q5VTB9 566 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 IRF2BP1Q8IU81 584 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 NELFBQ8WX92 580 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 OSBP2Q969R2 916 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 PLEKHG4BQ96PX9 1271 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 TRIM4Q9C037 500 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 TRIM21P19474 475 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 HSPA9P38646 679 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 RALYLQ86SE5 291 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCF11-204ENST00000530660 ANKS4BQ8N8V4 417 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 TLR10Q9BXR5 811 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 MAP3K15Q6ZN16 1313 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 CFAP73A6NFT4 308 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 UBOX5O94941 541 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 TPP2P29144 1249 aaPredicted RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 HLFQ16534 295 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 MYLK4Q86YV6 388 aaPredicted RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 ELAC2Q9BQ52 826 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 MTFR1LQ9H019 292 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 WDR35Q9P2L0 1181 aa15.57■□□□□ 0.08
PCF11-204ENST00000530660 MYO5AQ9Y4I1 1855 aaKnown RBP15.57■□□□□ 0.08
PCF11-204ENST00000530660 RNF113AO15541 343 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 GSTA1P08263 222 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 PAEPP09466 180 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 PARP1P09874 1014 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 IMPDH2P12268 514 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 LTKP29376 864 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 GUCY1A2P33402 732 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 IARSP41252 1262 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 SPAG1Q07617 926 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 PAK1Q13153 545 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
PCF11-204ENST00000530660 SPA17Q15506 151 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 IMMTQ16891 758 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 TRPM8Q7Z2W7 1104 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 DIS3L2Q8IYB7 885 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 WHAMMQ8TF30 809 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 GSDMAQ96QA5 445 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 OCEL1Q9H607 264 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 ZNHIT6Q9NWK9 470 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 ADAM22Q9P0K1 906 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 BLOC1S6Q9UL45 172 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 ZMYND8Q9ULU4 1186 aaPredicted RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 SRPRBQ9Y5M8 271 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 DIP2BQ9P265 1576 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 NUTM2BA6NNL0 878 aaPredicted RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 NUTM2EB1AL46 878 aaPredicted RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 FOXP2O15409 715 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 FGAP02671 866 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 PRLRP16471 622 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 MAGEA8P43361 318 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 NCALDP61601 193 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 C1orf141Q5JVX7 400 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 GOPCQ9HD26 462 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 HEG1Q9ULI3 1381 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 MYH7BA7E2Y1 1941 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 BUB1O43683 1085 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 KLHL7Q8IXQ5 586 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 CCDC82Q8N4S0 544 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 UBLCP1Q8WVY7 318 aaPredicted RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 XPO6Q96QU8 1125 aaKnown RBP15.56■□□□□ 0.08
PCF11-204ENST00000530660 STRN4Q9NRL3 753 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 AMOTL2Q9Y2J4 779 aa15.56■□□□□ 0.08
PCF11-204ENST00000530660 GPR75-ASB3A0A0A6YYF3 556 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 ATL2Q8NHH9 583 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 ZFAND2BQ8WV99 257 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 CCDC42Q96M95 316 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 METTL22Q9BUU2 404 aaPredicted RBP15.55■□□□□ 0.08
PCF11-204ENST00000530660 TRIM33Q9UPN9 1127 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 ASB3Q9Y575 518 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 PXDNQ92626 1479 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 RAD51CO43502 376 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 SHBGP04278 402 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 SH3RF1Q7Z6J0 888 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 SLC17A8Q8NDX2 589 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 NCOA7Q8NI08 942 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 SYMPKQ92797 1274 aaKnown RBP15.55■□□□□ 0.08
PCF11-204ENST00000530660 RPS6KC1Q96S38 1066 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 GDAQ9Y2T3 454 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 TMEM2Q9UHN6 1383 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 MYH1P12882 1939 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 LGALS16A8MUM7 142 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 RARAP10276 462 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 PCK1P35558 622 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 FLT3P36888 993 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 TYW1BQ6NUM6 668 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms