RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 SLC4A10Q6U841 1118 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 TPTE2Q6XPS3 522 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 FAM89AQ96GI7 184 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 EMILIN2Q9BXX0 1053 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 SNX11Q9Y5W9 270 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 UTYO14607 1347 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 SH3TC1Q8TE82 1336 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 CDHR2Q9BYE9 1310 aa11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 PLIN1O60240 522 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 CCT4P50991 539 aaKnown RBP11□□□□□ -0.65
CCDC90B-217ENST00000530253 OXCT1P55809 520 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 FCGRTP55899 365 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 ERVK-24P63145 666 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 ST5P78524 1137 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 CRY2Q49AN0 593 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 KSR1Q8IVT5 923 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC90B-217ENST00000530253 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 SLC38A3Q99624 504 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 COL4A1P02462 1669 aa11□□□□□ -0.65
CCDC90B-217ENST00000530253 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
CCDC90B-217ENST00000530253 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 GRM8O00222 908 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 IGHA2P01877 340 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 KCNA3P22001 575 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 RRP1P56182 461 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 SLC23A3Q6PIS1 610 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 UBE3BQ7Z3V4 1068 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 PDZD3Q86UT5 571 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 SULF2Q8IWU5 870 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 LRRN4CLQ8ND94 238 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 RBCK1Q9BYM8 510 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 USP44Q9H0E7 712 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 GTF2IRD1Q9UHL9 959 aa10.99□□□□□ -0.65
CCDC90B-217ENST00000530253 IRS4O14654 1257 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 LEFTY1O75610 366 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 CHRNA5P30532 468 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 TGFB2P61812 414 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 PANK1Q8TE04 598 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 EPS8L3Q8TE67 593 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 ISL2Q96A47 359 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 PLA2G12BQ9BX93 195 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 ADAMTS6Q9UKP5 1117 aa10.98□□□□□ -0.65
CCDC90B-217ENST00000530253 SRGNP10124 158 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 DPEP1P16444 411 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 PDE6BP35913 854 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 ZC3H12AQ5D1E8 599 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 ASB11Q8WXH4 323 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 MEIS3Q99687 375 aa10.97□□□□□ -0.65
CCDC90B-217ENST00000530253 RTL9Q8NET4 1388 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 ARNTP27540 789 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 FOXO4P98177 505 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 PDE4CQ08493 712 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 FTSJ3Q8IY81 847 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 SUCLG2Q96I99 432 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 TNKS2Q9H2K2 1166 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.65
CCDC90B-217ENST00000530253 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 NPHP1O15259 732 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 PDE8AO60658 829 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 CSF1RP07333 972 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 ITIH2P19823 946 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 NME2P22392 152 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 CTSWP56202 376 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 ANKRD44Q8N8A2 993 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 FAM53CQ9NYF3 392 aa10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 C9orf78Q9NZ63 289 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-217ENST00000530253 MYH3P11055 1940 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 IGF2BP3O00425 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 GRIN3BO60391 1043 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 NPR1P16066 1061 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 CD96P40200 585 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 RABL6Q3YEC7 729 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 STYK1Q6J9G0 422 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 BHLHE22Q8NFJ8 381 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 TTLL11Q8NHH1 800 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 PLAGL2Q9UPG8 496 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 SAMM50Q9Y512 469 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 U3KQE9 123 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 LRRC37AA6NMS7 1700 aa10.94□□□□□ -0.66
CCDC90B-217ENST00000530253 H0YIN7 160 aa10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 ZNF124Q15973 351 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms