RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SPACA3Q8IXA5 215 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 CCDC144CPQ8IYA2 1237 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 CKAP2LQ8IYA6 745 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 DTWD2Q8NBA8 298 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 KLHL6Q8WZ60 621 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 RNF112Q9ULX5 631 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 MINPP1Q9UNW1 487 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 ABCC6O95255 1503 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 CASZ1Q86V15 1759 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 NFAT5O94916 1531 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 SBNO2Q9Y2G9 1366 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 H3BS24 57 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 DDAH1O94760 285 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 ZNF865P0CJ78 1059 aaPredicted RBP7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 CD96P40200 585 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 TMC3Q7Z5M5 1100 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 FBXL18Q96ME1 805 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 ASPNQ9BXN1 380 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 PHAXQ9H814 394 aaKnown RBP7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 STK32BQ9NY57 414 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 SLC12A7Q9Y666 1083 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 WNK3Q9BYP7 1800 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 AKAP12Q02952 1782 aa7.03□□□□□ -1.28
AMBRA1-209ENST00000529963 TNS2Q63HR2 1409 aa7.02□□□□□ -1.28
AMBRA1-209ENST00000529963 SHISA3A0PJX4 238 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 CCDC85CA6NKD9 419 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 ZBTB7AO95365 584 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 RNF4P78317 190 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 SLC7A5Q01650 507 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 BNIP3Q12983 259 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 NBPF9Q3BBW0 867 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 PTF1AQ7RTS3 328 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 HDGFL2Q7Z4V5 671 aaPredicted RBP7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 CARD11Q9BXL7 1154 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 TRIM55Q9BYV6 548 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 FBXL21Q9UKT6 434 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 SBF2Q86WG5 1849 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 UTRNP46939 3433 aa7.02□□□□□ -1.29
AMBRA1-209ENST00000529963 MEIS1O00470 390 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 COBLO75128 1261 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 GJB6O95452 261 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 KIR3DL1P43629 444 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 RBL2Q08999 1139 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 AUHQ13825 339 aaKnown RBP7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 RAB33AQ14088 237 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 TXNRD1Q16881 649 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 MSMPQ1L6U9 139 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 FAM178BQ8IXR5 827 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 PRDM14Q9GZV8 571 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 MTFR1LQ9H019 292 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 ZSWIM5Q9P217 1185 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 KCNH3Q9ULD8 1083 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 ST14Q9Y5Y6 855 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 SHANK3Q9BYB0 1731 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 SHOXO15266 292 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 IL2RBP14784 551 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 GRIK1P39086 918 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 FXNQ16595 210 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 IFI16Q16666 785 aaKnown RBP7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 MRM1Q6IN84 353 aaKnown RBP7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 C22orf34Q6ZV56 151 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 NME9Q86XW9 330 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 UBXN4Q92575 508 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 FGD4Q96M96 766 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 MKNK2Q9HBH9 465 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 TERF2IPQ9NYB0 399 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 ZNF451Q9Y4E5 1061 aa7.01□□□□□ -1.29
AMBRA1-209ENST00000529963 EDC4Q6P2E9 1401 aaKnown RBP7□□□□□ -1.29
AMBRA1-209ENST00000529963 MON2Q7Z3U7 1717 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 CBFA2T2O43439 604 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 EPHX1P07099 455 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 DDR2Q16832 855 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 ZMYM1Q5SVZ6 1142 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 C7orf61Q8IZ16 206 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 BRF1Q92994 677 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 UBE2FQ969M7 185 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 ARMC5Q96C12 935 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 COX4I2Q96KJ9 171 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 HAUS7Q99871 368 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 DUSP15Q9H1R2 295 aaPredicted RBP7□□□□□ -1.29
AMBRA1-209ENST00000529963 RGPD5Q99666 1765 aa7□□□□□ -1.29
AMBRA1-209ENST00000529963 CD97P48960 835 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 AOC3Q16853 763 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 BBS9Q3SYG4 887 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 ZNF574Q6ZN55 896 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 ADCY4Q8NFM4 1077 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 PUS7Q96PZ0 661 aaKnown RBP6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 SLC12A5Q9H2X9 1139 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 ATP13A1Q9HD20 1204 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
AMBRA1-209ENST00000529963 CD163L1Q9NR16 1453 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms