RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 COL6A3P12111 3177 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 UMODL1Q5DID0 1318 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 LRRC37A2A6NM11 1700 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 DLL1O00548 723 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
TRIM3-209ENST00000529529 CCL23P55773 120 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 SEPT14Q6ZU15 432 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 RMDN3Q96TC7 470 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
TRIM3-209ENST00000529529 MAD2L2Q9UI95 211 aa18.84■□□□□ 0.61
TRIM3-209ENST00000529529 LAMA2P24043 3122 aaKnown RBP18.84■□□□□ 0.61
TRIM3-209ENST00000529529 ERICH2A1L162 156 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 A6NJR5 290 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 SGSM2O43147 1006 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 KPNA6O60684 536 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 ARIH2O95376 493 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 CFBP00751 764 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 FGBP02675 491 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 STXBP2Q15833 593 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 FAM47CQ5HY64 1035 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 ARHGEF16Q5VV41 709 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.6
TRIM3-209ENST00000529529 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.6
TRIM3-209ENST00000529529 MYLIPQ8WY64 445 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 IWS1Q96ST2 819 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 NOC4LQ9BVI4 516 aaKnown RBP18.83■□□□□ 0.6
TRIM3-209ENST00000529529 TRMT13Q9NUP7 481 aaKnown RBP18.83■□□□□ 0.6
TRIM3-209ENST00000529529 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
TRIM3-209ENST00000529529 PALM3A6NDB9 673 aaPredicted RBP18.82■□□□□ 0.6
TRIM3-209ENST00000529529 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 E7EWF7 191 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 ZBTB5O15062 677 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 SUPT20HL2P0C7V6 817 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 NBPF20Q3BBV1 942 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 CCDC62Q6P9F0 684 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 CHST3Q7LGC8 479 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 NCOA7Q8NI08 942 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 PPP1R13LQ8WUF5 828 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 SENP2Q9HC62 589 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
TRIM3-209ENST00000529529 CYP2C9P11712 490 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 DNAJB2P25686 324 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 CHMP4BP1P59074 171 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 LY6KQ17RY6 165 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 MTMR8Q96EF0 704 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 WNT8AQ9H1J5 351 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 PCDHA1Q9Y5I3 950 aa18.81■□□□□ 0.6
TRIM3-209ENST00000529529 TMEM265A0A087WTH1 108 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 PPP1R11O60927 126 aaPredicted RBP18.8■□□□□ 0.6
TRIM3-209ENST00000529529 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
TRIM3-209ENST00000529529 GH1P01241 217 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 NR3C2P08235 984 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 EIF2AK2P19525 551 aaKnown RBP18.8■□□□□ 0.6
TRIM3-209ENST00000529529 GRM4Q14833 912 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 WTAPQ15007 396 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 OTOP2Q7RTS6 562 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 RPUSD2Q8IZ73 545 aaKnown RBP18.8■□□□□ 0.6
TRIM3-209ENST00000529529 HERVK_113Q902F9 699 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 TIFAQ96CG3 184 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 SCLYQ96I15 445 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 PIGSQ96S52 555 aa18.8■□□□□ 0.6
TRIM3-209ENST00000529529 OPLAHO14841 1288 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 PBX2P40425 430 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 HSD17B4P51659 736 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 SART3Q15020 963 aaKnown RBP18.79■□□□□ 0.6
TRIM3-209ENST00000529529 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 RIOX1Q9H6W3 641 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
TRIM3-209ENST00000529529 CXXC1Q9P0U4 656 aaPredicted RBP18.79■□□□□ 0.6
TRIM3-209ENST00000529529 MYCLP12524 364 aaPredicted RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 FOSL2P15408 326 aa18.78■□□□□ 0.6
TRIM3-209ENST00000529529 ARHGAP1Q07960 439 aa18.78■□□□□ 0.6
TRIM3-209ENST00000529529 SLC35G1Q2M3R5 365 aa18.78■□□□□ 0.6
TRIM3-209ENST00000529529 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
TRIM3-209ENST00000529529 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
TRIM3-209ENST00000529529 MAFAQ8NHW3 353 aaPredicted RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 MTIF3Q9H2K0 278 aaKnown RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 MAP3K20Q9NYL2 800 aaKnown RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 DDX41Q9UJV9 622 aaKnown RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 RBM8AQ9Y5S9 174 aaKnown RBP18.78■□□□□ 0.6
TRIM3-209ENST00000529529 CASTP20810 708 aaKnown RBP18.77■□□□□ 0.6
TRIM3-209ENST00000529529 HOXA13P31271 388 aaPredicted RBP18.77■□□□□ 0.6
TRIM3-209ENST00000529529 PTPN11Q06124 597 aaPredicted RBP18.77■□□□□ 0.6
TRIM3-209ENST00000529529 TROAPQ12815 778 aa18.77■□□□□ 0.6
TRIM3-209ENST00000529529 TRAF1Q13077 416 aa18.77■□□□□ 0.6
TRIM3-209ENST00000529529 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
TRIM3-209ENST00000529529 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRIM3-209ENST00000529529 IGDCC4Q8TDY8 1250 aa18.77■□□□□ 0.6
TRIM3-209ENST00000529529 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
TRIM3-209ENST00000529529 PNMA6FA0A0J9YX94 578 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 CYTH3O43739 400 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 MMP3P08254 477 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms