RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, humanhuman

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-208ENST00000529524 SCRN1Q12765 414 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 RTP5Q14D33 572 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 BVESQ8NE79 360 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 MTA3Q9BTC8 594 aa6.79□□□□□ -1.32
PSMA1-208ENST00000529524 PLS3P13797 630 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 GJA8P48165 433 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 RBM10P98175 930 aaKnown RBP6.78□□□□□ -1.32
PSMA1-208ENST00000529524 CACNB2Q08289 660 aaPredicted RBP6.78□□□□□ -1.32
PSMA1-208ENST00000529524 WWC2Q6AWC2 1192 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 FERMT3Q86UX7 667 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 DDX1Q92499 740 aaKnown RBP6.78□□□□□ -1.32
PSMA1-208ENST00000529524 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 MARCH2Q9P0N8 246 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 APEX2Q9UBZ4 518 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
PSMA1-208ENST00000529524 SH3D21A4FU49 640 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
PSMA1-208ENST00000529524 SMARCA5O60264 1052 aaPredicted RBP6.77□□□□□ -1.33
PSMA1-208ENST00000529524 HTRA3P83110 453 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 CARFQ8N187 725 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 DDX11Q96FC9 970 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 CCSER2Q9H7U1 834 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 EMC9Q9Y3B6 208 aa6.77□□□□□ -1.33
PSMA1-208ENST00000529524 SARSP49591 514 aaKnown RBP6.76□□□□□ -1.33
PSMA1-208ENST00000529524 GJA9P57773 515 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 SMAD4Q13485 552 aaKnown RBP6.76□□□□□ -1.33
PSMA1-208ENST00000529524 NCAPHQ15003 741 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 FAM169BQ8N8A8 192 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 CPA5Q8WXQ8 436 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 MMP19Q99542 508 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 AP5M1Q9H0R1 490 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 NTMQ9P121 344 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
PSMA1-208ENST00000529524 ADRB1P08588 477 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 CYP2C8P10632 490 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 ZFYVE27Q5T4F4 411 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 CD300LDQ6UXZ3 194 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 DCP2Q8IU60 420 aaKnown RBP6.75□□□□□ -1.33
PSMA1-208ENST00000529524 COPS5Q92905 334 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 TGIF2Q9GZN2 237 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 CYP26B1Q9NR63 512 aa6.75□□□□□ -1.33
PSMA1-208ENST00000529524 C22orf46C9J442 243 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 THBDP07204 575 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
PSMA1-208ENST00000529524 SPATS1Q496A3 300 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 SV2CQ496J9 727 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 GTF2IRD2BQ6EKJ0 949 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 IQCEQ6IPM2 695 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 ETV3LQ6ZN32 361 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 GTF2IRD2Q86UP8 949 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 ZNF513Q8N8E2 541 aaPredicted RBP6.74□□□□□ -1.33
PSMA1-208ENST00000529524 PLEKHO2Q8TD55 490 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 LGR4Q9BXB1 951 aa6.74□□□□□ -1.33
PSMA1-208ENST00000529524 K7ESM1 405 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 CNR2P34972 360 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 DLX2Q07687 328 aaPredicted RBP6.73□□□□□ -1.33
PSMA1-208ENST00000529524 MBLAC2Q68D91 279 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 CEP68Q76N32 757 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 TRIM59Q8IWR1 403 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 DPF3Q92784 378 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 BORCS6Q96GS4 357 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 SPATA6Q9NWH7 488 aaPredicted RBP6.73□□□□□ -1.33
PSMA1-208ENST00000529524 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
PSMA1-208ENST00000529524 NOBOXO60393 691 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 SSBP05455 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
PSMA1-208ENST00000529524 ECI1P42126 302 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 RPL11P62913 178 aaKnown RBP6.72□□□□□ -1.33
PSMA1-208ENST00000529524 INF2Q27J81 1249 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
PSMA1-208ENST00000529524 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 STK32CQ86UX6 486 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 TRMT2BQ96GJ1 504 aaKnown RBP6.72□□□□□ -1.33
PSMA1-208ENST00000529524 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 NKX2-4Q9H2Z4 354 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 CAPN10Q9HC96 672 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 PCDH18Q9HCL0 1135 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
PSMA1-208ENST00000529524 TIMM13Q9Y5L4 95 aaPredicted RBP6.72□□□□□ -1.33
PSMA1-208ENST00000529524 SMAD7O15105 426 aaKnown RBP6.71□□□□□ -1.34
PSMA1-208ENST00000529524 SGSM2O43147 1006 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 MYO1BO43795 1136 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 SNRPB2P08579 225 aaKnown RBP6.71□□□□□ -1.34
PSMA1-208ENST00000529524 KCNJ6P48051 423 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 ZC3H18Q86VM9 953 aaKnown RBP6.71□□□□□ -1.34
PSMA1-208ENST00000529524 FRS2Q8WU20 508 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 SEC14L1Q92503 715 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 GPR20Q99678 358 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 KIAA1522Q9P206 1035 aaPredicted RBP6.71□□□□□ -1.34
PSMA1-208ENST00000529524 JAG2Q9Y219 1238 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 DUSP10Q9Y6W6 482 aa6.71□□□□□ -1.34
PSMA1-208ENST00000529524 DDAH1O94760 285 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms