RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 DCAF4Q8WV16 495 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 FAM168AQ92567 244 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 MTA3Q9BTC8 594 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 PHF20Q9BVI0 1012 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 CRTAC1Q9NQ79 661 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 PDLIM7Q9NR12 457 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 FBXL7Q9UJT9 491 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 RWDD3Q9Y3V2 267 aa7.02□□□□□ -1.28
CD44-230ENST00000528922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.02□□□□□ -1.28
CD44-230ENST00000528922 DISP3Q9P2K9 1392 aa7.02□□□□□ -1.29
CD44-230ENST00000528922 LAMC3Q9Y6N6 1575 aa7.02□□□□□ -1.29
CD44-230ENST00000528922 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 A0A1W2PQC6 194 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 TLDC2A0PJX2 215 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 SDHBP21912 280 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 TACR1P25103 407 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 CORO7P57737 925 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 CYP4F8P98187 520 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 STYK1Q6J9G0 422 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
CD44-230ENST00000528922 GPR27Q9NS67 375 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 TRAF6Q9Y4K3 522 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 PCDHA2Q9Y5H9 948 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 TIMM13Q9Y5L4 95 aaPredicted RBP7.01□□□□□ -1.29
CD44-230ENST00000528922 CCDC163A0A0D9SF12 145 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 BCL6P41182 706 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
CD44-230ENST00000528922 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 RSPO2Q6UXX9 243 aaPredicted RBP7.01□□□□□ -1.29
CD44-230ENST00000528922 LZTR1Q8N653 840 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 PLEKHO2Q8TD55 490 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
CD44-230ENST00000528922 FANCLQ9NW38 375 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 BTG4Q9NY30 223 aa7.01□□□□□ -1.29
CD44-230ENST00000528922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD44-230ENST00000528922 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
CD44-230ENST00000528922 FUCA1P04066 466 aa7□□□□□ -1.29
CD44-230ENST00000528922 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
CD44-230ENST00000528922 NLRP10Q86W26 655 aa7□□□□□ -1.29
CD44-230ENST00000528922 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
CD44-230ENST00000528922 PTPRN2Q92932 1015 aa7□□□□□ -1.29
CD44-230ENST00000528922 CDIP1Q9H305 208 aa7□□□□□ -1.29
CD44-230ENST00000528922 TNFRSF12AQ9NP84 129 aa7□□□□□ -1.29
CD44-230ENST00000528922 MARCH2Q9P0N8 246 aa7□□□□□ -1.29
CD44-230ENST00000528922 TNIKQ9UKE5 1360 aa7□□□□□ -1.29
CD44-230ENST00000528922 MRC2Q9UBG0 1479 aa6.99□□□□□ -1.29
CD44-230ENST00000528922 ERVFRD-1P60508 538 aa6.99□□□□□ -1.29
CD44-230ENST00000528922 GABREP78334 506 aa6.99□□□□□ -1.29
CD44-230ENST00000528922 CEP68Q76N32 757 aa6.99□□□□□ -1.29
CD44-230ENST00000528922 SLC7A14Q8TBB6 771 aa6.99□□□□□ -1.29
CD44-230ENST00000528922 NCOA5Q9HCD5 579 aaKnown RBP6.99□□□□□ -1.29
CD44-230ENST00000528922 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
CD44-230ENST00000528922 PDS5BQ9NTI5 1447 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 MYO1BO43795 1136 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 RAPGEF3O95398 923 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 ASMTLO95671 621 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 CENPBP07199 599 aaPredicted RBP6.98□□□□□ -1.29
CD44-230ENST00000528922 FPR2P25090 351 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 ARL4AP40617 200 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 GPR85P60893 370 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 LSAMPQ13449 338 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 TKFCQ3LXA3 575 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 BICRALQ6AI39 1079 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
CD44-230ENST00000528922 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 APPBP2Q92624 585 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 CLUHP3Q96NS8 147 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 ZFYVE21Q9BQ24 234 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 SLC6A17Q9H1V8 727 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 SLC52A2Q9HAB3 445 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
CD44-230ENST00000528922 NDOR1Q9UHB4 597 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 WDR62O43379 1518 aa6.98□□□□□ -1.29
CD44-230ENST00000528922 PEG3Q9GZU2 1588 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 HECW2Q9P2P5 1572 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.97□□□□□ -1.29
CD44-230ENST00000528922 A0A1W2PQJ5 194 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 C22orf46C9J442 243 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 GLI4P10075 376 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 GTF2A2P52657 109 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 TRIM61Q5EBN2 209 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 PRR23BQ6ZRT6 265 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 IFNL3Q8IZI9 196 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 FAM9AQ8IZU1 332 aaPredicted RBP6.97□□□□□ -1.29
CD44-230ENST00000528922 Q8N1Y9 231 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 GSTCDQ8NEC7 633 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 USP33Q8TEY7 942 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 CHAMP1Q96JM3 812 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 MRPL4Q9BYD3 311 aaKnown RBP6.97□□□□□ -1.29
CD44-230ENST00000528922 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
CD44-230ENST00000528922 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
CD44-230ENST00000528922 ENPP3O14638 875 aa6.96□□□□□ -1.3
CD44-230ENST00000528922 PLD2O14939 933 aa6.96□□□□□ -1.3
CD44-230ENST00000528922 KCNQ2O43526 872 aa6.96□□□□□ -1.3
CD44-230ENST00000528922 CDC45O75419 566 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms