RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 JMJD4Q9H9V9 463 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 TNKSO95271 1327 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 DHX16O60231 1041 aaKnown RBP18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 CPT1AP50416 773 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 FAM47CQ5HY64 1035 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 SEPT14Q6ZU15 432 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 GPHNQ9NQX3 736 aaPredicted RBP18.15■□□□□ 0.5
CLNS1A-210ENST00000528364 A6NJR5 290 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 RBAK-RBAKDNI3L0D1 243 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 NKRFO15226 690 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 RABGGTBP53611 331 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 CHMP4BP1P59074 171 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 LY6KQ17RY6 165 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 MPHOSPH6Q99547 160 aaKnown RBP18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 KRT23Q9C075 422 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 NKX2-4Q9H2Z4 354 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 ABCB11O95342 1321 aa18.14■□□□□ 0.49
CLNS1A-210ENST00000528364 PTH1RQ03431 593 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 TTLL4Q14679 1199 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 SEC23AQ15436 765 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 DEFB128Q7Z7B8 93 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 FBXO11Q86XK2 927 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 AFG1LQ8WV93 481 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 PPM1EQ8WY54 764 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 UBAC1Q9BSL1 405 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 PRDM6Q9NQX0 595 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 MSRAQ9UJ68 235 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
CLNS1A-210ENST00000528364 B4DLN1 442 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 MYOGP15173 224 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 MRPL12P52815 198 aaKnown RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 SLC35G1Q2M3R5 365 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 BRDTQ58F21 947 aaPredicted RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 IFIT1BQ5T764 474 aaKnown RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 RPUSD2Q8IZ73 545 aaKnown RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 NSUN6Q8TEA1 469 aaKnown RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 RMDN3Q96TC7 470 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 MRPL11Q9Y3B7 192 aaKnown RBP18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
CLNS1A-210ENST00000528364 SCN5AQ14524 2016 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 UNC80Q8N2C7 3258 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 ZBBXA8MT70 800 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 KLRF2D3W0D1 207 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 OPLAHO14841 1288 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 PPP1R11O60927 126 aaPredicted RBP18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 CFBP00751 764 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 EIF2AK2P19525 551 aaKnown RBP18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 NT5C2P49902 561 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 ADGRE1Q14246 886 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 MCF2L2Q86YR7 1114 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 SLC4A7Q9Y6M7 1214 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 MYH6P13533 1939 aa18.11■□□□□ 0.49
CLNS1A-210ENST00000528364 RAD50Q92878 1312 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 KPNA6O60684 536 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 RAB30Q15771 203 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 STXBP2Q15833 593 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 ARHGEF16Q5VV41 709 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 NFRKBQ6P4R8 1299 aa18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 MTIF3Q9H2K0 278 aaKnown RBP18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 TRIP12Q14669 1992 aaPredicted RBP18.1■□□□□ 0.49
CLNS1A-210ENST00000528364 GBF1Q92538 1859 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 GH1P01241 217 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 NR3C2P08235 984 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 MMP3P08254 477 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 CYP21A2P08686 494 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 CHMLP26374 656 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 TET1Q8NFU7 2136 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 KAT2BQ92831 832 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 ZFP91Q96JP5 570 aaPredicted RBP18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 IWS1Q96ST2 819 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 AMNQ9BXJ7 453 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 DDX41Q9UJV9 622 aaKnown RBP18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
CLNS1A-210ENST00000528364 CDH23Q9H251 3354 aa18.08■□□□□ 0.49
CLNS1A-210ENST00000528364 TTC28Q96AY4 2481 aa18.08■□□□□ 0.49
CLNS1A-210ENST00000528364 PALM3A6NDB9 673 aaPredicted RBP18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 SORBS3O60504 671 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 IQCF3P0C7M6 154 aa18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 HOXA13P31271 388 aaPredicted RBP18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 CCDC85BQ15834 202 aaPredicted RBP18.08■□□□□ 0.48
CLNS1A-210ENST00000528364 MTMR8Q96EF0 704 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms