RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	AP5M1	Q9H0R1	490 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	SLC12A7	Q9Y666	1083 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	LRRC37A2	A6NM11	1700 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	SMCHD1	A6NHR9	2005 aa		13.63	□□□□□ -0.23
PSMC3-205	ENST00000528362	LCT	P09848	1927 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	ARIH2	O95376	493 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	CALM1	P0DP23	149 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	CALM2	P0DP24	149 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	CALM3	P0DP25	149 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	EIF2AK2	P19525	551 aa	Known RBP	13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	SMARCA1	P28370	1054 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	HOXA13	P31271	388 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	HSPA4	P34932	840 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	GNAQ	P50148	359 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	TRAF1	Q13077	416 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	PPP2R5B	Q15173	497 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	ARHGEF16	Q5VV41	709 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	APOA5	Q6Q788	366 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	CXCL17	Q6UXB2	119 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	MICU3	Q86XE3	530 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	CMTR1	Q8N1G2	835 aa	Known RBP	13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	SCFD2	Q8WU76	684 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	RRP36	Q96EU6	259 aa	Known RBP	13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	IWS1	Q96ST2	819 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	LZTS2	Q9BRK4	669 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	PXMP2	Q9NR77	195 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362	PRKAG2	Q9UGJ0	569 aa		13.62	□□□□□ -0.23
PSMC3-205	ENST00000528362		A0A0U1RQG5	324 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362		B4DLN1	442 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	ARVCF	O00192	962 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	REC8	O95072	547 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	NR3C2	P08235	984 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	CLTB	P09497	229 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	POLR2M	P0CAP2	368 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	CDK7	P50613	346 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	MRPL12	P52815	198 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	CCDC62	Q6P9F0	684 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	TMTC3	Q6ZXV5	915 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	SAMD3	Q8N6K7	520 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	FANCB	Q8NB91	859 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	COPS5	Q92905	334 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	TOX2	Q96NM4	488 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	PDCD2L	Q9BRP1	358 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	UBE2O	Q9C0C9	1292 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	MAP3K20	Q9NYL2	800 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	BRPF3	Q9ULD4	1205 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	SNX14	Q9Y5W7	946 aa		13.61	□□□□□ -0.23
PSMC3-205	ENST00000528362	NKRF	O15226	690 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	ZEB2	O60315	1214 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	CABYR	O75952	493 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	HMGB1	P09429	215 aa	Known RBP	13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	TXN	P10599	105 aa	Known RBP	13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	CPA1	P15085	419 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	ITGB8	P26012	769 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	FAAP100	Q0VG06	881 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	TTLL4	Q14679	1199 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	STXBP2	Q15833	593 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	SLC43A3	Q8NBI5	491 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	OR6J1	Q8NGC5	347 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	IL31RA	Q8NI17	732 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	VTI1A	Q96AJ9	217 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	JAKMIP1	Q96N16	626 aa	Known RBP	13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	GRIN2D	O15399	1336 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	MCM3AP	O60318	1980 aa		13.6	□□□□□ -0.23
PSMC3-205	ENST00000528362	DCDC2C	A8MYV0	355 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	SOX1	O00570	391 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	KIAA0355	O15063	1070 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	EIF3J	O75822	258 aa	Known RBP	13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	RGS20	O76081	388 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	SYNE3	Q6ZMZ3	975 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	SEPT14	Q6ZU15	432 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	FCHSD1	Q86WN1	690 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	FAM126B	Q8IXS8	530 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	TDH	Q8IZJ6	230 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	BAD	Q92934	168 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	SEC63	Q9UGP8	760 aa	Known RBP	13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	TBX21	Q9UL17	535 aa		13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	LAMA2	P24043	3122 aa	Known RBP	13.59	□□□□□ -0.23
PSMC3-205	ENST00000528362	KLF18	A0A0U1RQI7	1052 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	hCG_1642624	A0A1W2PR95	340 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	ZBTB43	O43298	467 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	CPT1A	P50416	773 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	PSMC6	P62333	389 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	PURA	Q00577	322 aa	Known RBP	13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	FUT2	Q10981	343 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	ITGA7	Q13683	1181 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	PGM5	Q15124	567 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	LY6K	Q17RY6	165 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	VSIG10L	Q86VR7	867 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	CCDC82	Q8N4S0	544 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	TMEM39A	Q9NV64	488 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	FRMPD4	Q14CM0	1322 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	MROH7	Q68CQ1	1323 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362	CNTNAP5	Q8WYK1	1306 aa		13.58	□□□□□ -0.24
PSMC3-205	ENST00000528362		A6NJR5	290 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	GOLGA8A	A7E2F4	631 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	GOLGA8B	A8MQT2	603 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms