RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 BLOC1S4Q9NUP1 217 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC66A2RUB6 948 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 MAP2K7O14733 419 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 BUB1O43683 1085 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 RNASE9P60153 205 aaKnown RBP8.31□□□□□ -1.08
C11orf54-207ENST00000528288 GSTO1P78417 241 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 KCNB1Q14721 858 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 WHAMMP3Q1A5X7 153 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 TRAPPC11Q7Z392 1133 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 KRT25Q7Z3Z0 450 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 MSANTD4Q8NCY6 345 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 SNX29Q8TEQ0 813 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 HDAC7Q8WUI4 952 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 PCDHAC2Q9Y5I4 1007 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 CAPN6Q9Y6Q1 641 aa8.31□□□□□ -1.08
C11orf54-207ENST00000528288 LDHCP07864 332 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 RHBDL3P58872 404 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 C16orf86Q6ZW13 317 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 COG1Q8WTW3 980 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC42Q96M95 316 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 HAUS4Q9H6D7 363 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 DDX4Q9NQI0 724 aaKnown RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 IPO7O95373 1038 aaKnown RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 PDHBP11177 359 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 GNA11P29992 359 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 NAP1L1P55209 391 aaKnown RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 NEDD1Q8NHV4 660 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 ANKS1AQ92625 1134 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC47Q96A33 483 aaKnown RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 DHTKD1Q96HY7 919 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 DEF6Q9H4E7 631 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 SNED1Q8TER0 1413 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 KIAA1551Q9HCM1 1747 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 LAMB2P55268 1798 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L15C9J2P7 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L13C9JLJ4 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L11C9JVI0 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L18D6R9N7 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L22D6RA61 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L17D6RBQ6 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L19D6RCP7 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L20D6RJB6 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 PPP1R11O60927 126 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-207ENST00000528288 ERLIN1O75477 346 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L24Q0WX57 530 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L6PQ6QN14 398 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 SLC30A10Q6XR72 485 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 DAGLBQ8NCG7 672 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 TTYH3Q9C0H2 523 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 ARHGAP20Q9P2F6 1191 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 RAB21Q9UL25 225 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 LEMD3Q9Y2U8 911 aa8.3□□□□□ -1.08
C11orf54-207ENST00000528288 A0A1W2PQC6 194 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 CYLC1P35663 651 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 STAT3P40763 770 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 PPP4CP60510 307 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 TCP10Q12799 353 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 NFRKBQ6P4R8 1299 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 LARP4BQ92615 738 aaKnown RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 DDX12PQ92771 950 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SPZ1Q9BXG8 430 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 LCMT1Q9UIC8 334 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 E9PMD0 336 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ATP8B1O43520 1251 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 KRT86O43790 486 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 CAPN2P17655 700 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 C7orf25Q9BPX7 421 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 BCAS3Q9H6U6 928 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 KCNQ5Q9NR82 932 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 CASZ1Q86V15 1759 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 GPR75-ASB3A0A0A6YYF3 556 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 PSMD14O00487 310 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 AKR1B10O60218 316 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ADCY7P51828 1080 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 KRT83P78385 493 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ZBED6P86452 979 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 RASSF7Q02833 373 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 KIF5AQ12840 1032 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ZSCAN26Q16670 478 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 IFIH1Q9BYX4 1025 aaKnown RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 DLEC1Q9Y238 1755 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 TNRC6CQ9HCJ0 1690 aaKnown RBP8.29□□□□□ -1.08
C11orf54-207ENST00000528288 BICDL2A1A5D9 508 aa8.29□□□□□ -1.08
C11orf54-207ENST00000528288 SERPINB2P05120 415 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms