RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 LAMA4Q16363 1823 aa16.52■□□□□ 0.23
CAPN1-212ENST00000527887 MCM3APO60318 1980 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 E7EWF7 191 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
CAPN1-212ENST00000527887 ZBTB5O15062 677 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
CAPN1-212ENST00000527887 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
CAPN1-212ENST00000527887 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 RMDN3Q96TC7 470 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 HIPK3Q9H422 1215 aa16.51■□□□□ 0.23
CAPN1-212ENST00000527887 EIF3JO75822 258 aaKnown RBP16.5■□□□□ 0.23
CAPN1-212ENST00000527887 CSF2RAP15509 400 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-212ENST00000527887 GRM4Q14833 912 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 WTAPQ15007 396 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 ARHGEF16Q5VV41 709 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 CCDC62Q6P9F0 684 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 STAG2Q8N3U4 1231 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 TBC1D5Q92609 795 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.23
CAPN1-212ENST00000527887 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-212ENST00000527887 MTIF3Q9H2K0 278 aaKnown RBP16.5■□□□□ 0.23
CAPN1-212ENST00000527887 RIOX1Q9H6W3 641 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 IL23AQ9NPF7 189 aa16.5■□□□□ 0.23
CAPN1-212ENST00000527887 B4GALT4O60513 344 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 HSD17B4P51659 736 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 NFRKBQ6P4R8 1299 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
CAPN1-212ENST00000527887 GUCD1Q96NT3 240 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 PPP1R12CQ9BZL4 782 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
CAPN1-212ENST00000527887 CFBP00751 764 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 GH1P01241 217 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 MYL3P08590 195 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 PTGS1P23219 599 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 CYP2C18P33260 490 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 PSMC6P62333 389 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 TROAPQ12815 778 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 STOX1Q6ZVD7 989 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 NOC4LQ9BVI4 516 aaKnown RBP16.48■□□□□ 0.23
CAPN1-212ENST00000527887 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 LRRC37A2A6NM11 1700 aa16.48■□□□□ 0.23
CAPN1-212ENST00000527887 FGBP02675 491 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 NR3C2P08235 984 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 PFKMP08237 780 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 IGDCC4Q8TDY8 1250 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 EMID1Q96A84 441 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-212ENST00000527887 COL20A1Q9P218 1284 aa16.47■□□□□ 0.23
CAPN1-212ENST00000527887 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
CAPN1-212ENST00000527887 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 ARIH2O95376 493 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
CAPN1-212ENST00000527887 KIF5BP33176 963 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 NBPF20Q3BBV1 942 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 SEPT14Q6ZU15 432 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 MB21D2Q8IYB1 491 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-212ENST00000527887 COPS5Q92905 334 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 FAM161BQ96MY7 647 aa16.46■□□□□ 0.23
CAPN1-212ENST00000527887 CDX2Q99626 313 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-212ENST00000527887 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
CAPN1-212ENST00000527887 LCTP09848 1927 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-212ENST00000527887 OPLAHO14841 1288 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 PPP1R11O60927 126 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-212ENST00000527887 POLR2MP0CAP2 368 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 TGFB3P10600 412 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 EIF2AK2P19525 551 aaKnown RBP16.45■□□□□ 0.22
CAPN1-212ENST00000527887 DNAJB2P25686 324 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 MCM5P33992 734 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 RFC2P35250 354 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 GNAQP50148 359 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 LAMC2Q13753 1193 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 LY6KQ17RY6 165 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 VSIG10LQ86VR7 867 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 TMEM87BQ96K49 555 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 PDCD2LQ9BRP1 358 aa16.45■□□□□ 0.22
CAPN1-212ENST00000527887 TTYH1Q9H313 450 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-212ENST00000527887 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 DDAH1O94760 285 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 ACRP10323 421 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 CCL23P55773 120 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 ARHGAP1Q07960 439 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 DGKDQ16760 1214 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms