RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CTAGE4Q8IX94 777 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
USP47-207ENST00000527733 GSTTP1A0A1W2PQM5 241 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 PDS5AQ29RF7 1337 aaKnown RBP16.67■□□□□ 0.26
USP47-207ENST00000527733 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
USP47-207ENST00000527733 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
USP47-207ENST00000527733 IL1R1P14778 569 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 GAP43P17677 238 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 DPCR1Q3MIW9 517 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 GAS2L3Q86XJ1 694 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 TMOD1P28289 359 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 LIG4P49917 911 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 ADAM9Q13443 819 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 SNRNP48Q6IEG0 339 aaKnown RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 GRAMD1CQ8IYS0 662 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 RMDN3Q96TC7 470 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 TSGA10Q9BZW7 698 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 NUCKS1Q9H1E3 243 aaKnown RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 FAM207AQ9NSI2 230 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 SEPT7Q16181 437 aaKnown RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 DHTKD1Q96HY7 919 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 KIAA0753Q2KHM9 967 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 KCNB2Q92953 911 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 RNF146Q9NTX7 359 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 NDUFB10O96000 172 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 BCRP11274 1271 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 TNNI1P19237 187 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 CNGA1P29973 690 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 MCM6Q14566 821 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 RESP18Q5W5W9 173 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 JPH2Q9BR39 696 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 DISC1Q9NRI5 854 aa16.66■□□□□ 0.26
USP47-207ENST00000527733 SEPT9Q9UHD8 586 aaPredicted RBP16.66■□□□□ 0.26
USP47-207ENST00000527733 GUCY1A2P33402 732 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 ANGEL2Q5VTE6 544 aaKnown RBP16.65■□□□□ 0.26
USP47-207ENST00000527733 ZDHHC15Q96MV8 337 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 LRRIQ4A6NIV6 560 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 MEIS1O00470 390 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 ABT1Q9ULW3 272 aaKnown RBP16.65■□□□□ 0.26
USP47-207ENST00000527733 IKBKBO14920 756 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 CLEC10AQ8IUN9 316 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
USP47-207ENST00000527733 FAM47CQ5HY64 1035 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
USP47-207ENST00000527733 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 EEPD1Q7L9B9 569 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 GJA10Q969M2 543 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 PLA2G4BP0C869 781 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 ACTN2P35609 894 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 ARMCX5Q6P1M9 558 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 LPAR1Q92633 364 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 FAM20AQ96MK3 541 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 MAN1B1Q9UKM7 699 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
USP47-207ENST00000527733 KLHL30Q0D2K2 578 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 PAGE5Q96GU1 130 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 NLRC4Q9NPP4 1024 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 RIC8AQ9NPQ8 531 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 ARHGEF6Q15052 776 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 MAP3K14Q99558 947 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 FERMT1Q9BQL6 677 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 TMEM260Q9NX78 707 aa16.64■□□□□ 0.25
USP47-207ENST00000527733 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 LMNB1P20700 586 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 CEP112Q8N8E3 955 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 HMGCS2P54868 508 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 NSUN6Q8TEA1 469 aaKnown RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 P2RX5Q93086 422 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 DEFB129Q9H1M3 183 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 CGNQ9P2M7 1197 aaKnown RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 SFMBT2Q5VUG0 894 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 RRAGAQ7L523 313 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 SAMD7Q7Z3H4 446 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 HOOK3Q86VS8 718 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms