RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 USP17L10C9JJH3 530 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 ABCB11O95342 1321 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 PSMD2Q13200 908 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 SEPT2Q15019 361 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 TSR1Q2NL82 804 aaKnown RBP17.15■□□□□ 0.34
USH1C-207ENST00000527720 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 CNOT6LQ96LI5 555 aaKnown RBP17.15■□□□□ 0.34
USH1C-207ENST00000527720 DBNDD1Q9H9R9 158 aa17.15■□□□□ 0.34
USH1C-207ENST00000527720 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
USH1C-207ENST00000527720 FCER1AP12319 257 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
USH1C-207ENST00000527720 SNX29Q8TEQ0 813 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
USH1C-207ENST00000527720 PSME4Q14997 1843 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 MYMKA6NI61 221 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 FGFR1OPO95684 399 aaKnown RBP17.14■□□□□ 0.33
USH1C-207ENST00000527720 MCM6Q14566 821 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 UBE2SQ16763 222 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 CERKLQ49MI3 558 aaPredicted RBP17.14■□□□□ 0.33
USH1C-207ENST00000527720 FIGNQ5HY92 759 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
USH1C-207ENST00000527720 FAM53CQ9NYF3 392 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.33
USH1C-207ENST00000527720 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 POTEMA6NI47 508 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 APBA3O96018 575 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 SLC16A2P36021 539 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 USP11P51784 963 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 TUBB4BP68371 445 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 HYIQ5T013 277 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 RSRC2Q7L4I2 434 aaKnown RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 ZFPM1Q8IX07 1006 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 GPR161Q8N6U8 529 aaKnown RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 ACRBPQ8NEB7 543 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 B4DLN1 442 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 H0YIN7 160 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 ECE2O60344 883 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 NDUFA10O95299 355 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 TBC1D8BQ0IIM8 1120 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 MEA1Q16626 185 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 HAS1Q92839 578 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 IRX2Q9BZI1 471 aaPredicted RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 FAM198AQ9UFP1 575 aa17.13■□□□□ 0.33
USH1C-207ENST00000527720 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
USH1C-207ENST00000527720 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 SLC1A4P43007 532 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 CLCN6P51797 869 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 EHHADHQ08426 723 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 ZNF569Q5MCW4 686 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 ZNF662Q6ZS27 426 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
USH1C-207ENST00000527720 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 CDC23Q9UJX2 597 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
USH1C-207ENST00000527720 ZBED6P86452 979 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
USH1C-207ENST00000527720 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 GOLGA1Q92805 767 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 KCNQ5Q9NR82 932 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
USH1C-207ENST00000527720 CYP3A7-CYP3A51PA0A087WV96 503 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 TRIM21P19474 475 aaKnown RBP17.11■□□□□ 0.33
USH1C-207ENST00000527720 CYP3A7P24462 503 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 ARHGAP25P42331 645 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 FKBP15Q5T1M5 1219 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 KRT222Q8N1A0 295 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 GMCL1P1Q8NEA9 526 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 MBOAT7Q96N66 472 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 CHP1Q99653 195 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 ATRNL1Q5VV63 1379 aa17.11■□□□□ 0.33
USH1C-207ENST00000527720 MARCH6O60337 910 aa17.1■□□□□ 0.33
USH1C-207ENST00000527720 RBM5P52756 815 aaKnown RBP eCLIP17.1■□□□□ 0.33
USH1C-207ENST00000527720 TCP10Q12799 353 aa17.1■□□□□ 0.33
USH1C-207ENST00000527720 DDX12PQ92771 950 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms