RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 MKI67P46013 3256 aaKnown RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 H0YGN5 161 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 OPLAHO14841 1288 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 ZEB2O60315 1214 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 SMPD1P17405 629 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 EDNRBP24530 442 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 ANAPC15P60006 121 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 TAPT1Q6NXT6 567 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 FBXL16Q8N461 479 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 TSEN34Q9BSV6 310 aaKnown RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 PXMP2Q9NR77 195 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 PHF24Q9UPV7 400 aa15.42■□□□□ 0.06
CAPN1-209ENST00000527469 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-209ENST00000527469 MOXD2PA6NHM9 499 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 DYNC1LI2O43237 492 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-209ENST00000527469 ACLYP53396 1101 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 NAPAP54920 295 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 GJA9P57773 515 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 GHRHRQ02643 423 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 TTLL4Q14679 1199 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 KCNA10Q16322 511 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 GPKOWQ92917 476 aaPredicted RBP eCLIP15.41■□□□□ 0.06
CAPN1-209ENST00000527469 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
CAPN1-209ENST00000527469 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 LCTP09848 1927 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
CAPN1-209ENST00000527469 A0A1W2PQ45 241 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 A0A1W2PQY0 241 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 CPLX1O14810 134 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 NKRFO15226 690 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 ADCY6O43306 1168 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 NR3C2P08235 984 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 TXNP10599 105 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 CDC27P30260 824 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 CCND2P30279 289 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 LRRC26Q2I0M4 334 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 CPLX2Q6PUV4 134 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 GLT1D1Q96MS3 346 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 AGXT2Q9BYV1 514 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 STARD7Q9NQZ5 370 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 RBM27Q9P2N5 1060 aaKnown RBP15.4■□□□□ 0.06
CAPN1-209ENST00000527469 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 Q9Y3F1 56 aa15.4■□□□□ 0.06
CAPN1-209ENST00000527469 MYADML2A6NDP7 307 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 SPDYE3A6NKU9 549 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-209ENST00000527469 CPT1AP50416 773 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
CAPN1-209ENST00000527469 BEX3Q00994 111 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 PPP1R18Q6NYC8 613 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 SLC39A5Q6ZMH5 540 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 PDCD2LQ9BRP1 358 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.05
CAPN1-209ENST00000527469 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
CAPN1-209ENST00000527469 RBM47A0AV96 593 aaKnown RBP15.38■□□□□ 0.05
CAPN1-209ENST00000527469 ASGR1P07306 291 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CAPN1-209ENST00000527469 RTP1P59025 263 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 STK3Q13188 491 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-209ENST00000527469 PGM5Q15124 567 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
CAPN1-209ENST00000527469 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-209ENST00000527469 ZMYND8Q9ULU4 1186 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-209ENST00000527469 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 CABYRO75952 493 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 ADCY7P51828 1080 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 FUT2Q10981 343 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 VSIG10LQ86VR7 867 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 PHKBQ93100 1093 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-209ENST00000527469 LARP6Q9BRS8 491 aaKnown RBP15.37■□□□□ 0.05
CAPN1-209ENST00000527469 SLC26A6Q9BXS9 759 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 GLT8D2Q9H1C3 349 aa15.37■□□□□ 0.05
CAPN1-209ENST00000527469 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
CAPN1-209ENST00000527469 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
CAPN1-209ENST00000527469 PRDM5Q9NQX1 630 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms