RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MRVI1Q9Y6F6 885 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 DEFB115Q30KQ5 88 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1.01
SMPD1-203ENST00000527275 WNT7AO00755 349 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 CUTAO60888 179 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 POLR2MP0CAP2 368 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 INHBEP58166 350 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 NONOQ15233 471 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMPD1-203ENST00000527275 Q3C1V9 767 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 PCDHB6Q9Y5E3 794 aa21.33■■□□□ 1.01
SMPD1-203ENST00000527275 RASSF10A6NK89 507 aa21.33■■□□□ 1
SMPD1-203ENST00000527275 FCHSD1Q86WN1 690 aa21.33■■□□□ 1
SMPD1-203ENST00000527275 MCF2L2Q86YR7 1114 aa21.33■■□□□ 1
SMPD1-203ENST00000527275 TBCKQ8TEA7 893 aa21.33■■□□□ 1
SMPD1-203ENST00000527275 PARK7Q99497 189 aaKnown RBP21.33■■□□□ 1
SMPD1-203ENST00000527275 PFKFB1P16118 471 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 IFNL1Q8IU54 200 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 RIOX2Q8IUF8 465 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 PDLIM2Q96JY6 352 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 CLIC6Q96NY7 704 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 SDF4Q9BRK5 362 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 NOL7Q9UMY1 257 aaKnown RBP21.32■■□□□ 1
SMPD1-203ENST00000527275 CEP131Q9UPN4 1083 aa21.32■■□□□ 1
SMPD1-203ENST00000527275 SPDYE3A6NKU9 549 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 ZNF202O95125 648 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 HSD17B4P51659 736 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 AP3B2Q13367 1082 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 SHC4Q6S5L8 630 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 ANKRD13CQ8N6S4 541 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 KRI1Q8N9T8 703 aaKnown RBP21.31■■□□□ 1
SMPD1-203ENST00000527275 TRIM44Q96DX7 344 aaPredicted RBP21.31■■□□□ 1
SMPD1-203ENST00000527275 MOV10L1Q9BXT6 1211 aaKnown RBP21.31■■□□□ 1
SMPD1-203ENST00000527275 TRAPPC10P48553 1259 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 NSMFQ6X4W1 530 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 TEX2Q8IWB9 1127 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 ANO3Q9BYT9 981 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 R3HDMLQ9H3Y0 253 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 ACAD9Q9H845 621 aa21.31■■□□□ 1
SMPD1-203ENST00000527275 RPS6P62753 249 aaKnown RBP21.3■■□□□ 1
SMPD1-203ENST00000527275 ERVK-9P63128 1117 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 ERVK-24P63145 666 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 SREBF2Q12772 1141 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 TKFCQ3LXA3 575 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 ANO6Q4KMQ2 910 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 NCAPG2Q86XI2 1143 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 FAM200AQ8TCP9 573 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 GTF3C2Q8WUA4 911 aaPredicted RBP21.3■■□□□ 1
SMPD1-203ENST00000527275 CAPNS2Q96L46 248 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 FOSP01100 380 aaPredicted RBP21.3■■□□□ 1
SMPD1-203ENST00000527275 GCLCP48506 637 aaPredicted RBP21.3■■□□□ 1
SMPD1-203ENST00000527275 GHRHRQ02643 423 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 NOGQ13253 232 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 TTC38Q5R3I4 469 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 RESP18Q5W5W9 173 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 COL20A1Q9P218 1284 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 HPSEQ9Y251 543 aa21.3■■□□□ 1
SMPD1-203ENST00000527275 ERCC3P19447 782 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 PTPREP23469 700 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 HTRA3P83110 453 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 LETM2Q2VYF4 491 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 NEK8Q86SG6 692 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 CHST13Q8NET6 341 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
SMPD1-203ENST00000527275 FAM237AA0A1B0GTK4 181 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 EDIL3O43854 480 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 AOC2O75106 756 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 SYKP43405 635 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 TM4SF4P48230 202 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 BAATQ14032 418 aaPredicted RBP21.29■■□□□ 1
SMPD1-203ENST00000527275 TAF1CQ15572 869 aaPredicted RBP21.29■■□□□ 1
SMPD1-203ENST00000527275 ZNF174Q15697 407 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 MCTP2Q6DN12 878 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 SLC30A10Q6XR72 485 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 GPRC5AQ8NFJ5 357 aa21.29■■□□□ 1
SMPD1-203ENST00000527275 A1CFQ9NQ94 594 aaKnown RBP21.29■■□□□ 1
SMPD1-203ENST00000527275 FBXO2Q9UK22 296 aaPredicted RBP21.29■■□□□ 1
SMPD1-203ENST00000527275 SYTL5Q8TDW5 730 aaPredicted RBP21.28■■□□□ 1
SMPD1-203ENST00000527275 MAP3K20Q9NYL2 800 aaKnown RBP21.28■■□□□ 1
SMPD1-203ENST00000527275 MYH7BA7E2Y1 1941 aa21.28■■□□□ 1
SMPD1-203ENST00000527275 SLC25A27O95847 323 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 MCM7P33993 719 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 TIGD1Q96MW7 591 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■■□□□ 1
SMPD1-203ENST00000527275 SAMD3Q8N6K7 520 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 CRYGNQ8WXF5 182 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
SMPD1-203ENST00000527275 PORCNQ9H237 461 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 CYP39A1Q9NYL5 469 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 FBXO40Q9UH90 709 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 USP25Q9UHP3 1055 aa21.27■■□□□ 1
SMPD1-203ENST00000527275 SRPRBQ9Y5M8 271 aaKnown RBP21.27■■□□□ 1
SMPD1-203ENST00000527275 CCNT1O60563 726 aaKnown RBP21.26■□□□□ 0.99
SMPD1-203ENST00000527275 CAVIN2O95810 425 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 DNAJC25Q9H1X3 360 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 CBX8Q9HC52 389 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 MORF4L1Q9UBU8 362 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 MORC2Q9Y6X9 1032 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-203ENST00000527275 SREBF1P36956 1147 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms