RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 GHRHRQ02643 423 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 TRAF1Q13077 416 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 GRB14Q14449 540 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 KIF22Q14807 665 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 USH1GQ495M9 461 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
PSMD13-206ENST00000527047 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
PSMD13-206ENST00000527047 MAF1Q9H063 256 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 ACAD9Q9H845 621 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 HOMER2Q9NSB8 354 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 PCDHA1Q9Y5I3 950 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 DNAJC25-GNG10A0A024R161 153 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 SLC15A5A6NIM6 579 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
PSMD13-206ENST00000527047 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 SCG2P13521 617 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
PSMD13-206ENST00000527047 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
PSMD13-206ENST00000527047 CUL4AQ13619 759 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
PSMD13-206ENST00000527047 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 SMARCC2Q8TAQ2 1214 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 KCNV2Q8TDN2 545 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 COA7Q96BR5 231 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
PSMD13-206ENST00000527047 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
PSMD13-206ENST00000527047 STXBP3O00186 592 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 JAK2O60674 1132 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 DTNBO60941 627 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 DEXIO95424 95 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 FCER1AP12319 257 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 OTOP1Q7RTM1 612 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 CCAR1Q8IX12 1150 aaKnown RBP13.6□□□□□ -0.23
PSMD13-206ENST00000527047 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PSMD13-206ENST00000527047 SHISA4Q96DD7 197 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
PSMD13-206ENST00000527047 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 SRRDQ9UH36 339 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 MCM3APO60318 1980 aa13.6□□□□□ -0.23
PSMD13-206ENST00000527047 PTPDC1A2A3K4 754 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
PSMD13-206ENST00000527047 IGHA2P01877 340 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 HOXC6P09630 235 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 ADORA2AP29274 412 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 HSD17B4P51659 736 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 AKAP17AQ02040 695 aaKnown RBP13.59□□□□□ -0.23
PSMD13-206ENST00000527047 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 HEATR3Q7Z4Q2 680 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 MMP19Q99542 508 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 CYP39A1Q9NYL5 469 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
PSMD13-206ENST00000527047 GABRQQ9UN88 632 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 PFASO15067 1338 aa13.59□□□□□ -0.23
PSMD13-206ENST00000527047 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 COBLO75128 1261 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
PSMD13-206ENST00000527047 HOXD10P28358 340 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 FLT3LGP49771 235 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 PRMT2P55345 433 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 PRKCZQ05513 592 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 IRF5Q13568 498 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 KCTD2Q14681 263 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 MCF2L2Q86YR7 1114 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 TEX2Q8IWB9 1127 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 FAM177A1Q8N128 213 aaPredicted RBP13.58□□□□□ -0.24
PSMD13-206ENST00000527047 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 FGD4Q96M96 766 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.24
PSMD13-206ENST00000527047 MAP3K20Q9NYL2 800 aaKnown RBP13.58□□□□□ -0.24
PSMD13-206ENST00000527047 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 MEIS2O14770 477 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 PGK2P07205 417 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 NAPAP54920 295 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
PSMD13-206ENST00000527047 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
PSMD13-206ENST00000527047 BAATQ14032 418 aaPredicted RBP13.57□□□□□ -0.24
PSMD13-206ENST00000527047 NSMFQ6X4W1 530 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 SLC30A10Q6XR72 485 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
PSMD13-206ENST00000527047 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms