RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
SSRP1-203ENST00000526696 ACACBO00763 2458 aa16.22■□□□□ 0.19
SSRP1-203ENST00000526696 DMXL1Q9Y485 3027 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 H0Y858 1186 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 MBD4O95243 580 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 RASA1P20936 1047 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 GPM6BQ13491 265 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 PTGISQ16647 500 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 GDF6Q6KF10 455 aaPredicted RBP16.21■□□□□ 0.19
SSRP1-203ENST00000526696 TRAF7Q6Q0C0 670 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 OR6J1Q8NGC5 347 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 TLR9Q9NR96 1032 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 INSL6Q9Y581 213 aa16.21■□□□□ 0.19
SSRP1-203ENST00000526696 ZBED9Q6R2W3 1325 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 RBM47A0AV96 593 aaKnown RBP16.2■□□□□ 0.18
SSRP1-203ENST00000526696 PRR23AA6NEV1 266 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 STXBP3O00186 592 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 TBX10O75333 385 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 CHGBP05060 677 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 RBL2Q08999 1139 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 MBTPS1Q14703 1052 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 CTR9Q6PD62 1173 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 COPS5Q92905 334 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 TRERF1Q96PN7 1200 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
SSRP1-203ENST00000526696 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 NOD1Q9Y239 953 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
SSRP1-203ENST00000526696 CEP250Q9BV73 2442 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 SPTBN2O15020 2390 aa16.2■□□□□ 0.18
SSRP1-203ENST00000526696 IGKV6D-41A0A0C4DH26 115 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 A6NJR5 290 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 AVPR2P30518 371 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 ID4P47928 161 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 ATP8B2P98198 1209 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 HYAL1Q12794 435 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 SMAD4Q13485 552 aaKnown RBP16.19■□□□□ 0.18
SSRP1-203ENST00000526696 TRMT2AQ8IZ69 625 aaKnown RBP16.19■□□□□ 0.18
SSRP1-203ENST00000526696 ASIC4Q96FT7 647 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
SSRP1-203ENST00000526696 CKBP12277 381 aa16.18■□□□□ 0.18
SSRP1-203ENST00000526696 ALAS1P13196 640 aa16.18■□□□□ 0.18
SSRP1-203ENST00000526696 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSRP1-203ENST00000526696 IKBKEQ14164 716 aa16.18■□□□□ 0.18
SSRP1-203ENST00000526696 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
SSRP1-203ENST00000526696 RALGAPA2Q2PPJ7 1873 aa16.18■□□□□ 0.18
SSRP1-203ENST00000526696 ZFHX4Q86UP3 3567 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 MED19A0JLT2 244 aaPredicted RBP16.17■□□□□ 0.18
SSRP1-203ENST00000526696 LINC01565O15544 149 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 LGR5O75473 907 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 SNAP25P60880 206 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
SSRP1-203ENST00000526696 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 STK11IPQ8N1F8 1099 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
SSRP1-203ENST00000526696 CCDC155Q8N6L0 562 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 WNT8BQ93098 351 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 MKL1Q969V6 931 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 SAMD11Q96NU1 681 aa16.17■□□□□ 0.18
SSRP1-203ENST00000526696 LOC730098B7Z3J9 87 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 TMEM232C9JQI7 657 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 GOLIM4O00461 696 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 EFCAB14O75071 495 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
SSRP1-203ENST00000526696 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
SSRP1-203ENST00000526696 SIGLEC14Q08ET2 396 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
SSRP1-203ENST00000526696 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 FBXO11Q86XK2 927 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 MYOCDQ8IZQ8 938 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 KAT2BQ92831 832 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 IRF2BPLQ9H1B7 796 aa16.16■□□□□ 0.18
SSRP1-203ENST00000526696 BAHCC1Q9P281 2608 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 NCK2O43639 380 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 KPNA6O60684 536 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 PARNO95453 639 aaKnown RBP16.15■□□□□ 0.18
SSRP1-203ENST00000526696 BMP3P12645 472 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 TRIM27P14373 513 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 ADD2P35612 726 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 CBX2Q14781 532 aaPredicted RBP16.15■□□□□ 0.18
SSRP1-203ENST00000526696 NSMFQ6X4W1 530 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 AACSQ86V21 672 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
SSRP1-203ENST00000526696 GMCL1P1Q8NEA9 526 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 CD207Q9UJ71 328 aa16.15■□□□□ 0.18
SSRP1-203ENST00000526696 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-203ENST00000526696 FDX1P10109 184 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 NBL1P41271 181 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 CEP95Q96GE4 821 aa16.14■□□□□ 0.17
SSRP1-203ENST00000526696 MSLNLQ96KJ4 702 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms