RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 POTEB2H3BUK9 544 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 CLK2P49760 499 aaKnown RBP22.74■■□□□ 1.23
SMIM3-201ENST00000526627 BEND6Q5SZJ8 279 aaPredicted RBP22.74■■□□□ 1.23
SMIM3-201ENST00000526627 COA1Q9GZY4 146 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 CTAGE15A4D2H0 777 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 PPEF1O14829 653 aaPredicted RBP22.74■■□□□ 1.23
SMIM3-201ENST00000526627 TTLL1O95922 423 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 CTAGE8P0CG41 777 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 SHMT1P34896 483 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 TUBB4BP68371 445 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 PDIA5Q14554 519 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 NCAPH2Q6IBW4 605 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 TTBK2Q6IQ55 1244 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 KCNK18Q7Z418 384 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 CTAGE6Q86UF2 777 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 CTAGE4Q8IX94 777 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 ADGRF4Q8IZF3 695 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 NHEJ1Q9H9Q4 299 aaPredicted RBP22.74■■□□□ 1.23
SMIM3-201ENST00000526627 SUGT1Q9Y2Z0 365 aa22.74■■□□□ 1.23
SMIM3-201ENST00000526627 PNMA6FA0A0J9YX94 578 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 A0A1W2PQJ5 194 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 SMC1AQ14683 1233 aaKnown RBP22.73■■□□□ 1.23
SMIM3-201ENST00000526627 UBE2SQ16763 222 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 TMEM119Q4V9L6 283 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 SEPT12Q8IYM1 358 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 NOA1Q8NC60 698 aaKnown RBP22.73■■□□□ 1.23
SMIM3-201ENST00000526627 RAD54LQ92698 747 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 MXD3Q9BW11 206 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 EHHADHQ08426 723 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 TMEM266Q2M3C6 531 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 CCDC122Q5T0U0 273 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 PPP1R18Q6NYC8 613 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 DYMQ7RTS9 669 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 LACRTQ9GZZ8 138 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 SERPINB13Q9UIV8 391 aa22.73■■□□□ 1.23
SMIM3-201ENST00000526627 ADAMTSL1Q8N6G6 1762 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 GREB1LQ9C091 1923 aaPredicted RBP22.72■■□□□ 1.23
SMIM3-201ENST00000526627 EIF3CLB5ME19 914 aaKnown RBP22.72■■□□□ 1.23
SMIM3-201ENST00000526627 OAS2P29728 719 aaKnown RBP22.72■■□□□ 1.23
SMIM3-201ENST00000526627 KRT83P78385 493 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 CDK17Q00537 523 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 ECM1Q16610 540 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 PPP4R3AQ6IN85 833 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 CCDC170Q8IYT3 715 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 EIF3CQ99613 913 aaKnown RBP22.72■■□□□ 1.23
SMIM3-201ENST00000526627 HDAC6Q9UBN7 1215 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 SIK3Q9Y2K2 1263 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 MYO3BQ8WXR4 1341 aa22.72■■□□□ 1.23
SMIM3-201ENST00000526627 ENC1O14682 589 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 ATP1A1P05023 1023 aaKnown RBP22.71■■□□□ 1.23
SMIM3-201ENST00000526627 TNNI2P48788 182 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 HAS1Q92839 578 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 ATP6V0A2Q9Y487 856 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 ANKRD31Q8N7Z5 1873 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 POLR3GO15318 223 aaPredicted RBP22.71■■□□□ 1.23
SMIM3-201ENST00000526627 RHOXF2BP0C7M4 288 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 CYLC1P35663 651 aaPredicted RBP22.71■■□□□ 1.23
SMIM3-201ENST00000526627 TMC4Q7Z404 712 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 GUF1Q8N442 669 aaKnown RBP22.71■■□□□ 1.23
SMIM3-201ENST00000526627 SNX29Q8TEQ0 813 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 JAKMIP2Q96AA8 810 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 RHOXF2Q9BQY4 288 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 USP40Q9NVE5 1235 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 SWAP70Q9UH65 585 aa22.71■■□□□ 1.23
SMIM3-201ENST00000526627 VSNL1P62760 191 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 VWA3BQ502W6 1294 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 PAPD7Q5XG87 772 aaKnown RBP22.7■■□□□ 1.22
SMIM3-201ENST00000526627 MTMR8Q96EF0 704 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 CDK5RAP3Q96JB5 506 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 PURBQ96QR8 312 aaKnown RBP22.7■■□□□ 1.22
SMIM3-201ENST00000526627 ZCCHC17Q9NP64 241 aaKnown RBP22.7■■□□□ 1.22
SMIM3-201ENST00000526627 ZNHIT6Q9NWK9 470 aaKnown RBP22.7■■□□□ 1.22
SMIM3-201ENST00000526627 MYH7BA7E2Y1 1941 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 EPHB6O15197 1021 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 SLURP2P0DP57 97 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 FKBP15Q5T1M5 1219 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 KIAA1328Q86T90 577 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 GLIS3Q8NEA6 775 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 PCMTD1Q96MG8 357 aaPredicted RBP22.7■■□□□ 1.22
SMIM3-201ENST00000526627 ABCB6Q9NP58 842 aa22.7■■□□□ 1.22
SMIM3-201ENST00000526627 ZNF263O14978 683 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 HNRNPH3P31942 346 aaKnown RBP22.69■■□□□ 1.22
SMIM3-201ENST00000526627 SLC16A2P36021 539 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 KRT79Q5XKE5 535 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 CDC42EP5Q6NZY7 148 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 LRRC55Q6ZSA7 311 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 DDX12PQ92771 950 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 RAB34Q9BZG1 259 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 CYP2C19P33261 490 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 SCNN1DP51172 638 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 SLC27A3Q5K4L6 730 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 GJA10Q969M2 543 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 NDST4Q9H3R1 872 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 L1RE1Q9UN81 338 aa22.69■■□□□ 1.22
SMIM3-201ENST00000526627 USP17L10C9JJH3 530 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 H3BQF6 201 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.68■■□□□ 1.22
SMIM3-201ENST00000526627 DDX25Q9UHL0 483 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms