RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 Q9Y3F1 56 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 PTPRSQ13332 1948 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 LOC102724159A0A0B4J2E5 919 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 CFBP00751 764 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 MYL3P08590 195 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 EIF2AK2P19525 551 aaKnown RBP14.04□□□□□ -0.16
SSBP3-210ENST00000525990 TROAPQ12815 778 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 PPP2R5BQ15173 497 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 PWP2Q15269 919 aaKnown RBP14.04□□□□□ -0.16
SSBP3-210ENST00000525990 LY6KQ17RY6 165 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 MFSD5Q6N075 450 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 RALYLQ86SE5 291 aaKnown RBP14.04□□□□□ -0.16
SSBP3-210ENST00000525990 RGS22Q8NE09 1264 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 NCOA7Q8NI08 942 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 PIBF1Q8WXW3 757 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-210ENST00000525990 PIGSQ96S52 555 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
SSBP3-210ENST00000525990 TXNP10599 105 aaKnown RBP14.03□□□□□ -0.16
SSBP3-210ENST00000525990 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-210ENST00000525990 WTAPQ15007 396 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 TMEM67Q5HYA8 995 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 TMEM240Q5SV17 173 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 IGDCC4Q8TDY8 1250 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 SCFD2Q8WU76 684 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 RMDN3Q96TC7 470 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 ESYT1Q9BSJ8 1104 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 AMNQ9BXJ7 453 aa14.03□□□□□ -0.16
SSBP3-210ENST00000525990 TTYH1Q9H313 450 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-210ENST00000525990 TRMT13Q9NUP7 481 aaKnown RBP14.03□□□□□ -0.16
SSBP3-210ENST00000525990 MRPL11Q9Y3B7 192 aaKnown RBP14.03□□□□□ -0.16
SSBP3-210ENST00000525990 ZBTB5O15062 677 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.17
SSBP3-210ENST00000525990 ZEB2O60315 1214 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 CABYRO75952 493 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 CYP2C9P11712 490 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 HSD17B4P51659 736 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 CCL23P55773 120 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 CCDC62Q6P9F0 684 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 RAB11FIP4Q86YS3 637 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.17
SSBP3-210ENST00000525990 WNT8AQ9H1J5 351 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.17
SSBP3-210ENST00000525990 HIPK3Q9H422 1215 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 LY9Q9HBG7 655 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 PXMP2Q9NR77 195 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 PCDHA1Q9Y5I3 950 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
SSBP3-210ENST00000525990 ERICH2A1L162 156 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 A6NJR5 290 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 GRXCR1A8MXD5 290 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 SLC27A2O14975 620 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 SORBS3O60504 671 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 RXRAP19793 462 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 CPT1AP50416 773 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 CHMP4BP1P59074 171 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 SMAD3P84022 425 aaKnown RBP14.01□□□□□ -0.17
SSBP3-210ENST00000525990 ARHGAP1Q07960 439 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 NBPF20Q3BBV1 942 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 ZNF697Q5TEC3 545 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 ZNF365Q70YC5 407 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 MCF2L2Q86YR7 1114 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 TET1Q8NFU7 2136 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 NSUN6Q8TEA1 469 aaKnown RBP14.01□□□□□ -0.17
SSBP3-210ENST00000525990 AFG1LQ8WV93 481 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 SCLYQ96I15 445 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 LRRC2Q9BYS8 371 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 POLR3EQ9NVU0 708 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
SSBP3-210ENST00000525990 PRC1O43663 620 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 RGS20O76081 388 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 NR3C2P08235 984 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 PBX2P40425 430 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 PPIGQ13427 754 aaKnown RBP eCLIP14□□□□□ -0.174e-9■■□□□ 14.2
SSBP3-210ENST00000525990 TTLL4Q14679 1199 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 FAM47CQ5HY64 1035 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 ZNF654Q8IZM8 581 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 CMTR1Q8N1G2 835 aaKnown RBP14□□□□□ -0.17
SSBP3-210ENST00000525990 TMEM199Q8N511 208 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
SSBP3-210ENST00000525990 MPHOSPH6Q99547 160 aaKnown RBP14□□□□□ -0.17
SSBP3-210ENST00000525990 MTG1Q9BT17 334 aaPredicted RBP14□□□□□ -0.17
SSBP3-210ENST00000525990 SEMA6BQ9H3T3 888 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
SSBP3-210ENST00000525990 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
SSBP3-210ENST00000525990 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 MMP3P08254 477 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 MYCLP12524 364 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 GHRHRQ02643 423 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 NECTIN1Q15223 517 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 STXBP2Q15833 593 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 RASIP1Q5U651 963 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms