RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 PRR33A8MZF0 331 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 NMT2O60551 498 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 CHMP4BP1P59074 171 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 PPARAQ07869 468 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 PPP2R5BQ15173 497 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 FAM178BQ8IXR5 827 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 ZBED2Q9BTP6 218 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 RANBP17Q9H2T7 1088 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 ECHDC1Q9NTX5 307 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 LMCD1Q9NZU5 365 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
CCDC90B-205ENST00000525916 PATL2C9JE40 543 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 IL9P15248 144 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 CALML3P27482 149 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 SLC16A2P36021 539 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 PTPN11Q06124 597 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 GPNMBQ14956 572 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 PTGISQ16647 500 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 CCDC96Q2M329 555 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 LRRFIP1Q32MZ4 808 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 BRDTQ58F21 947 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 TTBK2Q6IQ55 1244 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 GJD3Q8N144 294 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 UIMC1Q96RL1 719 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 CTAGE1Q96RT6 745 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 SUGCTQ9HAC7 445 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 ZNF318Q5VUA4 2279 aa14.77□□□□□ -0.05
CCDC90B-205ENST00000525916 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 LOC102724159A0A0B4J2E5 919 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 A6NJR5 290 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 TSPY2A6NKD2 308 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 NKRFO15226 690 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 ZFYP08048 801 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 KCNA5P22460 613 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 PDE4DQ08499 809 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 PWP2Q15269 919 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 TCTN1Q2MV58 587 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 CCDC155Q8N6L0 562 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 AFAP1L1Q8TED9 768 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 NACAP1Q9BZK3 213 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 NAPBQ9H115 298 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 INCENPQ9NQS7 918 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 C5orf42Q9H799 3197 aa14.76□□□□□ -0.05
CCDC90B-205ENST00000525916 LINC01553A4QN01 128 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 KPNA6O60684 536 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 ARIH2O95376 493 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 MRE11P49959 708 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 ERVK-21P61565 698 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 CTDSPL2Q05D32 466 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 GDF6Q6KF10 455 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 CNKSR3Q6P9H4 555 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 LRRC8DQ7L1W4 858 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 SCFD2Q8WU76 684 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 CLEC4DQ8WXI8 215 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 DHX38Q92620 1227 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 MYO7AQ13402 2215 aa14.75□□□□□ -0.05
CCDC90B-205ENST00000525916 FRMPD2Q68DX3 1309 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 NBNO60934 754 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 GJB5O95377 273 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 TXNP10599 105 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 SELPP16109 830 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 EDNRBP24530 442 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 SYDE2Q5VT97 1194 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 PTCRAQ6ISU1 281 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 FAM117BQ6P1L5 589 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 RNF207Q6ZRF8 634 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
CCDC90B-205ENST00000525916 RPS6P62753 249 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 BTNL9Q6UXG8 535 aa14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 GPATCH3Q96I76 525 aa14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 CRBNQ96SW2 442 aa14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 RAD9AQ99638 391 aa14.73□□□□□ -0.05
CCDC90B-205ENST00000525916 FOXP2O15409 715 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 RANBP6O60518 1105 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 CXCL10P02778 98 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 MMP3P08254 477 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 CKBP12277 381 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 ALADP13716 330 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 NHLH1Q02575 133 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 SESTD1Q86VW0 696 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 AFG1LQ8WV93 481 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 C17orf80Q9BSJ5 609 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 GPCPD1Q9NPB8 672 aa14.72□□□□□ -0.05
CCDC90B-205ENST00000525916 ABHD14A-ACY1A0A1B0GW23 586 aa14.71□□□□□ -0.05
CCDC90B-205ENST00000525916 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
CCDC90B-205ENST00000525916 H3BQ06 376 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms