RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 NSUN6Q8TEA1 469 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 RRP36Q96EU6 259 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 JAKMIP1Q96N16 626 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 RMDN3Q96TC7 470 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 WDR11Q9BZH6 1224 aa21.43■■□□□ 1.02
TSPAN4-215ENST00000525334 A0A1W2PPC1 479 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 DYNC1LI2O43237 492 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 ASGR1P07306 291 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 CPA1P15085 419 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 HOXA13P31271 388 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 MAGEA10P43363 369 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 DUSP28Q4G0W2 176 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 SYNE3Q6ZMZ3 975 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 FANCBQ8NB91 859 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 AP5M1Q9H0R1 490 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 STARD7Q9NQZ5 370 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 MAP3K20Q9NYL2 800 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
TSPAN4-215ENST00000525334 EIF2AK2P19525 551 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 FSCN1Q16658 493 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 ARHGEF16Q5VV41 709 aa21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 TMTC3Q6ZXV5 915 aa21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 IWS1Q96ST2 819 aa21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 PXMP2Q9NR77 195 aa21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 SEC63Q9UGP8 760 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 Q9Y3F1 56 aa21.41■■□□□ 1.02
TSPAN4-215ENST00000525334 GCOM1H8Y6P7 765 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 EPB41L2O43491 1005 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 POLR2MP0CAP2 368 aa21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 GLT1D1Q96MS3 346 aa21.4■■□□□ 1.02
TSPAN4-215ENST00000525334 ELP1O95163 1332 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 KLF18A0A0U1RQI7 1052 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 ZBTB43O43298 467 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 TLE2Q04725 743 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 PPP2R5BQ15173 497 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 STXBP2Q15833 593 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 CCDC82Q8N4S0 544 aa21.39■■□□□ 1.01
TSPAN4-215ENST00000525334 NR3C2P08235 984 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 FGD1P98174 961 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 CXCL17Q6UXB2 119 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 Q6ZUG5 572 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 PRDM5Q9NQX1 630 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 PDLIM7Q9NR12 457 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 RBM28Q9NW13 759 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 PRKAG2Q9UGJ0 569 aa21.38■■□□□ 1.01
TSPAN4-215ENST00000525334 hCG_1642624A0A1W2PR95 340 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 NKRFO15226 690 aaKnown RBP eCLIP21.37■■□□□ 1.011e-6■■■□□ 19.1
TSPAN4-215ENST00000525334 PQBP1O60828 265 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 ARIH2O95376 493 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 TXNP10599 105 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 RTN1Q16799 776 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 SEPT14Q6ZU15 432 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 FCHSD1Q86WN1 690 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 COPS5Q92905 334 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 VTI1AQ96AJ9 217 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 PDCD2LQ9BRP1 358 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 USP26Q9BXU7 913 aa21.37■■□□□ 1.01
TSPAN4-215ENST00000525334 LTBP2Q14767 1821 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 CNTNAP5Q8WYK1 1306 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 KIAA1217Q5T5P2 1943 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 A0A0U1RQG5 324 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 GOLGA8AA7E2F4 631 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 GOLGA8BA8MQT2 603 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 ZEB2O60315 1214 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 CASTP20810 708 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 PSMA5P28066 241 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 MDM2Q00987 491 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 CCDC62Q6P9F0 684 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 BRF1Q92994 677 aa21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-215ENST00000525334 EIF3JO75822 258 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 CABYRO75952 493 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 CLTBP09497 229 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 MYCLP12524 364 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 RCAN1P53805 252 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 APOBRQ0VD83 1088 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 PGM5Q15124 567 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 ANKRD33Q7Z3H0 272 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 SH3RF1Q7Z6J0 888 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 IL31RAQ8NI17 732 aa21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 UBE2OQ9C0C9 1292 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-215ENST00000525334 SZT2Q5T011 3432 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 TRIM43BA6NCK2 446 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 ARVCFO00192 962 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 CDC27P30260 824 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 CPT1AP50416 773 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 CDK7P50613 346 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 FUT2Q10981 343 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 TRIM43Q96BQ3 446 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 TOX2Q96NM4 488 aa21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 FAM217BQ9NTX9 383 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-215ENST00000525334 FRMPD4Q14CM0 1322 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 MROH7Q68CQ1 1323 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms