RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 PRDM5Q9NQX1 630 aaPredicted RBP9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 MTMR4Q9NYA4 1195 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 CLIP2Q9UDT6 1046 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 RIPK3Q9Y572 518 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 LAMA4Q16363 1823 aa9.96□□□□□ -0.82
DEPDC1-205ENST00000525124 MINDY4BA8MYZ0 360 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 CAPN5O15484 640 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 RAG1P15918 1043 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 CDK7P50613 346 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 GJA9P57773 515 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 FAAP100Q0VG06 881 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 ACVR2BQ13705 512 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 C20orf194Q5TEA3 1177 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 PCSK9Q8NBP7 692 aaKnown RBP9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 FGD4Q96M96 766 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 NUP88Q99567 741 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 KIAA1217Q5T5P2 1943 aa9.95□□□□□ -0.82
DEPDC1-205ENST00000525124 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 M0R2C6 588 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 ERC2O15083 957 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 RAD21O60216 631 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TIMP1P01033 207 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 BMP3P12645 472 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 ITGB8P26012 769 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TDO2P48775 406 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 FPGSQ05932 587 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 PDE4BQ07343 736 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 KCNA10Q16322 511 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 FAM160B2Q86V87 743 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TICAM2Q86XR7 235 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 GLT1D1Q96MS3 346 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 CDX2Q99626 313 aaPredicted RBP9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 KATNBL1Q9H079 304 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TTYH1Q9H313 450 aaPredicted RBP9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 SPC25Q9HBM1 224 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TMEM39AQ9NV64 488 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TBX21Q9UL17 535 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 WASF2Q9Y6W5 498 aa9.94□□□□□ -0.82
DEPDC1-205ENST00000525124 TANC1Q9C0D5 1861 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 SLC3A2P08195 630 aaKnown RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 TSPY3P0CV98 308 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 TSPY8P0CW00 308 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 NOVP48745 357 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 STAT2P52630 851 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 ZMYM1Q5SVZ6 1142 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 MFSD5Q6N075 450 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 CPXCR1Q8N123 301 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 ANKRD35Q8N283 1001 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 FAM133AQ8N9E0 248 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 PI4K2BQ8TCG2 481 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 CHURC1Q8WUH1 139 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 RNPC3Q96LT9 517 aaKnown RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 RAVER2Q9HCJ3 691 aaKnown RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 CTDP1Q9Y5B0 961 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-205ENST00000525124 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 SCN10AQ9Y5Y9 1956 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ZNF536O15090 1300 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 SALL3Q9BXA9 1300 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 LOC102724159A0A0B4J2E5 919 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 A0A0U1RQG5 324 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ASB14A6NK59 587 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ARVCFO00192 962 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ADCY6O43306 1168 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 PQBP1O60828 265 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ASGR1P07306 291 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 EPHB4P54760 987 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 PPARAQ07869 468 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 PWP2Q15269 919 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 CCDC144BQ3MJ40 725 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 SLFN13Q68D06 897 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 CCDC174Q6PII3 467 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 ARMCX2Q7L311 632 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 CCDC144CPQ8IYA2 1237 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 SLC43A3Q8NBI5 491 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 MAFAQ8NHW3 353 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 STAG1Q8WVM7 1258 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 LENG1Q96BZ8 264 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 FAM161BQ96MY7 647 aa9.92□□□□□ -0.82
DEPDC1-205ENST00000525124 NAPBQ9H115 298 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms