RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 LCTP09848 1927 aa12.74□□□□□ -0.37
CTSB-207ENST00000524654 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
CTSB-207ENST00000524654 CLTBP09497 229 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 CALM1P0DP23 149 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 CALM2P0DP24 149 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 CALM3P0DP25 149 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 CXCL17Q6UXB2 119 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 TDHQ8IZJ6 230 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
CTSB-207ENST00000524654 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
CTSB-207ENST00000524654 PXMP2Q9NR77 195 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 SLC12A7Q9Y666 1083 aa12.73□□□□□ -0.37
CTSB-207ENST00000524654 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
CTSB-207ENST00000524654 DCDC2CA8MYV0 355 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 ARVCFO00192 962 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTSB-207ENST00000524654 CABYRO75952 493 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 ARIH2O95376 493 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 ITGB8P26012 769 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
CTSB-207ENST00000524654 HSPA4P34932 840 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 GNAQP50148 359 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 KRT32Q14532 448 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 STXBP2Q15833 593 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
CTSB-207ENST00000524654 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
CTSB-207ENST00000524654 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 PPP4R2Q9NY27 417 aa12.72□□□□□ -0.37
CTSB-207ENST00000524654 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 MROH7Q68CQ1 1323 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 GCOM1H8Y6P7 765 aaPredicted RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 ZEB2O60315 1214 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 NR3C2P08235 984 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 POLR2MP0CAP2 368 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 RXRAP19793 462 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 CPT1AP50416 773 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 TTLL4Q14679 1199 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 BADQ92934 168 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.37
CTSB-207ENST00000524654 PDCD2LQ9BRP1 358 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
CTSB-207ENST00000524654 SMCHD1A6NHR9 2005 aa12.71□□□□□ -0.38
CTSB-207ENST00000524654 A6NJR5 290 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 REC8O95072 547 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 CD4P01730 458 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
CTSB-207ENST00000524654 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
CTSB-207ENST00000524654 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 APOA5Q6Q788 366 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 VSIG10LQ86VR7 867 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 RAB11FIP4Q86YS3 637 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 OR6J1Q8NGC5 347 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 COPS5Q92905 334 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 SNX14Q9Y5W7 946 aa12.7□□□□□ -0.38
CTSB-207ENST00000524654 LAMA3Q16787 3333 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
CTSB-207ENST00000524654 RGS20O76081 388 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 PSMC6P62333 389 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 PGM5Q15124 567 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 IL31RAQ8NI17 732 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
CTSB-207ENST00000524654 SEC63Q9UGP8 760 aaKnown RBP12.69□□□□□ -0.38
CTSB-207ENST00000524654 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
CTSB-207ENST00000524654 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 MEIS2O14770 477 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 KPNA6O60684 536 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 TIMP1P01033 207 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 GH1P01241 217 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 CPA1P15085 419 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 RAG1P15918 1043 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 FUT2Q10981 343 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
CTSB-207ENST00000524654 FCHSD1Q86WN1 690 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms