RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PTPRAP18433 802 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 INPP5BP32019 993 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 CIITAP33076 1130 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 SETQ01105 290 aaPredicted RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 SPP2Q13103 211 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 MTMR2Q13614 643 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 KARSQ15046 597 aaKnown RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 E2F4Q16254 413 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 DPCR1Q3MIW9 517 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 KLRG1Q96E93 195 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 MBOAT7Q96N66 472 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 TTC12Q9H892 705 aaPredicted RBP11.22□□□□□ -0.61
VPS13B-212ENST00000524330 PPP1R9AQ9ULJ8 1098 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
VPS13B-212ENST00000524330 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 VCAM1P19320 739 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
VPS13B-212ENST00000524330 ZNF75DP51815 510 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 SNAP25P60880 206 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 DPYDQ12882 1025 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 KCNB1Q14721 858 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 IL17AQ16552 155 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 PNMA8AQ86V59 439 aaPredicted RBP11.21□□□□□ -0.61
VPS13B-212ENST00000524330 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.61
VPS13B-212ENST00000524330 SPATA20Q8TB22 786 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
VPS13B-212ENST00000524330 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 HOXC10Q9NYD6 342 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 TCEAL9Q9UHQ7 104 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 ZHX2Q9Y6X8 837 aa11.21□□□□□ -0.61
VPS13B-212ENST00000524330 KIF20AO95235 890 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
VPS13B-212ENST00000524330 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS13B-212ENST00000524330 COG2Q14746 738 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 PRR16Q569H4 304 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
VPS13B-212ENST00000524330 ZSCAN30Q86W11 494 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 FAM43AQ8N2R8 423 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
VPS13B-212ENST00000524330 SLC38A10Q9HBR0 1119 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 EXOC1Q9NV70 894 aa11.2□□□□□ -0.62
VPS13B-212ENST00000524330 PVALEFA0A1B0GWK0 134 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 GLTPD2A6NH11 291 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 SLC37A4O43826 429 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 SERPINC1P01008 464 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 TPM2P07951 284 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 ALAS1P13196 640 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 PLCG1P19174 1290 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 MUTP22033 750 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 EPHX2P34913 555 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 CCT6AP40227 531 aaKnown RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 HIRAP54198 1017 aaPredicted RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 GSDMDP57764 484 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 SPAG1Q07617 926 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 KIAA1755Q5JYT7 1200 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 ISM2Q6H9L7 571 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 XRRA1Q6P2D8 792 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 C7orf25Q9BPX7 421 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 GLIS2Q9BZE0 524 aaPredicted RBP11.19□□□□□ -0.62
VPS13B-212ENST00000524330 WDR11Q9BZH6 1224 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 KCNMB3Q9NPA1 279 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 KBTBD4Q9NVX7 518 aa11.19□□□□□ -0.62
VPS13B-212ENST00000524330 A0A087X0B3 334 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 UNCXA6NJT0 531 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 ESPNB1AK53 854 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 B4DLN1 442 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 PSMA7O14818 248 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 FOXN1O15353 648 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 USP2O75604 605 aaPredicted RBP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 FGFR1OPO95684 399 aaKnown RBP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 DSG3P32926 999 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 COPB2P35606 906 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 HSD17B4P51659 736 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 ASIC1P78348 528 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms