RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 RANBP6O60518 1105 aaKnown RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 PPP2R2AP63151 447 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 MICU3Q86XE3 530 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 KIF2BQ8N4N8 673 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 MREGQ8N565 214 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 CCHCR1Q8TD31 782 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 GORASP1Q9BQQ3 440 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 HYOU1Q9Y4L1 999 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 UBN2Q6ZU65 1347 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 A0A0G2JS52 829 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 PDHA1P08559 390 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 HSD17B3P37058 310 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 ITIH3Q06033 890 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-224ENST00000524126 MTHFD1LQ6UB35 978 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 TAX1BP1Q86VP1 789 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 GALNT15Q8N3T1 639 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 KRT12Q99456 494 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM49BA6NDI0 452 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 LRRC10BA6NIK2 292 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 ORC4O43929 436 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 TACC1O75410 805 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 NQO1P15559 274 aaKnown RBP11.23□□□□□ -0.61
SPIDR-224ENST00000524126 PAFAH1B1P43034 410 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 ZNF844Q08AG5 666 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM29Q14134 588 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 NUGGCQ68CJ6 796 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 NOSTRINQ8IVI9 506 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 FAM81AQ8TBF8 368 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 TMX4Q9H1E5 349 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-224ENST00000524126 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 STK38LQ9Y2H1 464 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 MYO5AQ9Y4I1 1855 aaKnown RBP11.23□□□□□ -0.61
SPIDR-224ENST00000524126 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
SPIDR-224ENST00000524126 STXBP3O00186 592 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 FOXP2O15409 715 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 ALADP13716 330 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 MAGOHP61326 146 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NR5A1Q13285 461 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 KSR2Q6VAB6 950 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 P3H4Q92791 437 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 MAGOHBQ96A72 148 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 BABAM1Q9NWV8 329 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 ZNF232Q9UNY5 417 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 H0YGN5 161 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 GUCY1A2P33402 732 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 HSPA9P38646 679 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 HLTFQ14527 1009 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■□□□□ 8.5
SPIDR-224ENST00000524126 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 RBM41Q96IZ5 413 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 SALL4Q9UJQ4 1053 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NFS1Q9Y697 457 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 IFIT3O14879 490 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 KRT16P08779 473 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NCALDP61601 193 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 PDIA5Q14554 519 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 HLFQ16534 295 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 MEA1Q16626 185 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
SPIDR-224ENST00000524126 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 SLC26A6Q9BXS9 759 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 MTFR1LQ9H019 292 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms