RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 IRX6P78412 446 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 GRIN2CQ14957 1233 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 STXBP2Q15833 593 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 ARHGEF16Q5VV41 709 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 CATIPQ7Z7H3 387 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 NCOA7Q8NI08 942 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 SYTL5Q8TDW5 730 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 TIFAQ96CG3 184 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 IWS1Q96ST2 819 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 RMDN3Q96TC7 470 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 CPVLQ9H3G5 476 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
CTNNA1-240ENST00000523912 LRRC37A2A6NM11 1700 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 ZBTB5O15062 677 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 SGSM2O43147 1006 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 B4GALT4O60513 344 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 GH1P01241 217 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 PFKMP08237 780 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 CYP2C18P33260 490 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 PSMC6P62333 389 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 PURAQ00577 322 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 WTAPQ15007 396 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 FAM47CQ5HY64 1035 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.3□□□□□ -0.765e-13■■□□□ 13.1
CTNNA1-240ENST00000523912 TRPV6Q9H1D0 765 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 ALDH8A1Q9H2A2 487 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 IL23AQ9NPF7 189 aa10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 MAP3K20Q9NYL2 800 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-240ENST00000523912 MYO9BQ13459 2157 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 A6NJR5 290 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 TNFRSF10AO00220 468 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 CFBP00751 764 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 CYP21A2P08686 494 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 EIF2AK2P19525 551 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 PTGS1P23219 599 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 PTPN11Q06124 597 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 GRM4Q14833 912 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 SEC23AQ15436 765 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 RAB30Q15771 203 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 TMEM240Q5SV17 173 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 NFRKBQ6P4R8 1299 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 SEPT14Q6ZU15 432 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 CYB5R4Q7L1T6 521 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 SAMD3Q8N6K7 520 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 CCDC155Q8N6L0 562 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 NOC4LQ9BVI4 516 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 IL25Q9H293 177 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 TRMT13Q9NUP7 481 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 MSRAQ9UJ68 235 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
CTNNA1-240ENST00000523912 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 E7EWF7 191 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 EIF3JO75822 258 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 FGBP02675 491 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 POLR2MP0CAP2 368 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 ACRP10323 421 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 KIF5BP33176 963 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 RFC2P35250 354 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 CCL23P55773 120 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 TMEM63BQ5T3F8 832 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 CASC1Q6TDU7 716 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 C16orf59Q7L2K0 433 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 STAG2Q8N3U4 1231 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 RETREG2Q8NC44 543 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 HERVK_113Q902F9 699 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 TAAR1Q96RJ0 339 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 PXMP2Q9NR77 195 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 MAD2L2Q9UI95 211 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
CTNNA1-240ENST00000523912 PNMA6FA0A0J9YX94 578 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 ZBBXA8MT70 800 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 DDAH1O94760 285 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 NR3C2P08235 984 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 MMP3P08254 477 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 ACTN1P12814 892 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 HSD17B4P51659 736 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 GHRHRQ02643 423 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 PTH1RQ03431 593 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 BFSP2Q13515 415 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 LAMC2Q13753 1193 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 DGKDQ16760 1214 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 NFXL1Q6ZNB6 911 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 COPS5Q92905 334 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms