RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 SEC62Q99442 399 aaKnown RBP9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 IL17RBQ9NRM6 502 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 MYH7P12883 1935 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 A6NJR5 290 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 NFIBO00712 420 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 NMT2O60551 498 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 SLC16A2P36021 539 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 SYDE2Q5VT97 1194 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 RASGRP2Q7LDG7 609 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 SCFD2Q8WU76 684 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.913e-6■■■■□ 19.5
NSMCE2-213ENST00000523824 INCENPQ9NQS7 918 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
NSMCE2-213ENST00000523824 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 B4DLN1 442 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 PI4K2BG5E9Z4 385 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 LPXNO60711 386 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 TXNP10599 105 aaKnown RBP9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 MRPL12P52815 198 aaKnown RBP9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 WDR5P61964 334 aaKnown RBP9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 PTGISQ16647 500 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 BTNL9Q6UXG8 535 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 RNF207Q6ZRF8 634 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 SPRED2Q7Z698 418 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 CAGE1Q8TC20 777 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 AFAP1L1Q8TED9 768 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 GDPD5Q8WTR4 605 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 COPS5Q92905 334 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 FSD1Q9BTV5 496 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
NSMCE2-213ENST00000523824 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 LRRC37A2A6NM11 1700 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 SELPP16109 830 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 RPS6P62753 249 aaKnown RBP9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 CNKSR3Q6P9H4 555 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 SLC30A10Q6XR72 485 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 TMCO2Q7Z6W1 182 aaPredicted RBP9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 DNERQ8NFT8 737 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 RAD9AQ99638 391 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 UBE2ZQ9H832 354 aaPredicted RBP9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 CD320Q9NPF0 282 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 C11orf16Q9NQ32 467 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
NSMCE2-213ENST00000523824 PARNO95453 639 aaKnown RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 TOP1P11387 765 aaKnown RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 EDNRBP24530 442 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 ERVK-21P61565 698 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 DEFB103AP81534 67 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 GJD3Q8N144 294 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 AFG1LQ8WV93 481 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 CLEC4DQ8WXI8 215 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 UIMC1Q96RL1 719 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 TMEM47Q9BQJ4 181 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 DCTPP1Q9H773 170 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 SUGCTQ9HAC7 445 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
NSMCE2-213ENST00000523824 TTC41PQ6P2S7 1318 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 PRR33A8MZF0 331 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 ORC4O43929 436 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 EFCAB14O75071 495 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 ARIH2O95376 493 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 GJB5O95377 273 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 GH1P01241 217 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 ALADP13716 330 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 CASTP20810 708 aaKnown RBP9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 KCNA5P22460 613 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 NOVP48745 357 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 IKBKEQ14164 716 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 GPNMBQ14956 572 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 LY6KQ17RY6 165 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 LEXMQ3ZCV2 418 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 SEPT14Q6ZU15 432 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 CHST3Q7LGC8 479 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 FAM178BQ8IXR5 827 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 C7orf31Q8N865 590 aa9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.33□□□□□ -0.92
NSMCE2-213ENST00000523824 ANAPC4Q9UJX5 808 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms