RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 NLRP10Q86W26 655 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 Q8N1Y9 231 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 POU5F2Q8N7G0 328 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 DCAF4Q8WV16 495 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 SLC26A8Q96RN1 970 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 DHRS4Q9BTZ2 278 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 GPR27Q9NS67 375 aa8.24□□□□□ -1.09
CPNE3-207ENST00000523588 MYOCOSA0A1B0GUC4 107 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 A0A1W2PQJ5 194 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 HRKO00198 91 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 MSCO60682 206 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 C6orf222P0C671 652 aaPredicted RBP8.23□□□□□ -1.09
CPNE3-207ENST00000523588 BCL6P41182 706 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
CPNE3-207ENST00000523588 STYK1Q6J9G0 422 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 RPTNQ6XPR3 784 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 PHF20Q9BVI0 1012 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 KANSL2Q9H9L4 492 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 MARCH2Q9P0N8 246 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 MRPS23Q9Y3D9 190 aaKnown RBP8.23□□□□□ -1.09
CPNE3-207ENST00000523588 PCDHA2Q9Y5H9 948 aa8.23□□□□□ -1.09
CPNE3-207ENST00000523588 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 NUDT19A8MXV4 375 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 PEX10O60683 326 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 CYBBP04839 570 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 NR1I3Q14994 352 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 PAQR3Q6TCH7 311 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-207ENST00000523588 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 PTCH2Q9Y6C5 1203 aa8.22□□□□□ -1.09
CPNE3-207ENST00000523588 C22orf46C9J442 243 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 MYO1BO43795 1136 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 FARP2O94887 1054 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-207ENST00000523588 FPR2P25090 351 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 VIPR1P32241 457 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 GTF2A2P52657 109 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 RBM10P98175 930 aaKnown RBP8.21□□□□□ -1.1
CPNE3-207ENST00000523588 LSAMPQ13449 338 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 SQSTM1Q13501 440 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 ZSWIM2Q8NEG5 633 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 USP33Q8TEY7 942 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 SH3TC2Q8TF17 1288 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 X6R8D5 127 aa8.21□□□□□ -1.1
CPNE3-207ENST00000523588 ABLIM1O14639 778 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 NTRK1P04629 796 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 MAPKAPK2P49137 400 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 PLEKHN1Q494U1 663 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-207ENST00000523588 ZNF648Q5T619 568 aaPredicted RBP8.2□□□□□ -1.1
CPNE3-207ENST00000523588 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 CEP68Q76N32 757 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 NETO2Q8NC67 525 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 FAM84AQ96KN4 292 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 RNPC3Q96LT9 517 aaKnown RBP8.2□□□□□ -1.1
CPNE3-207ENST00000523588 IPO9Q96P70 1041 aaKnown RBP8.2□□□□□ -1.1
CPNE3-207ENST00000523588 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 RXFP1Q9HBX9 757 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 HCFC2Q9Y5Z7 792 aa8.2□□□□□ -1.1
CPNE3-207ENST00000523588 ZC3H12DA2A288 527 aaKnown RBP8.19□□□□□ -1.1
CPNE3-207ENST00000523588 IGSF3O75054 1194 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 GPR85P60893 370 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 LBX2Q6XYB7 198 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 CABP7Q86V35 215 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 RIOX2Q8IUF8 465 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 PTPRN2Q92932 1015 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 TRMT2BQ96GJ1 504 aaKnown RBP8.19□□□□□ -1.1
CPNE3-207ENST00000523588 TMEM169Q96HH4 297 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 TRAF6Q9Y4K3 522 aa8.19□□□□□ -1.1
CPNE3-207ENST00000523588 TEX51A0A1B0GUA7 166 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 F8W031 263 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-207ENST00000523588 H7BY64 318 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 KRT1P04264 644 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
CPNE3-207ENST00000523588 TMEM62Q0P6H9 643 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 MAMDC2Q7Z304 686 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-207ENST00000523588 IFNL3Q8IZI9 196 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
CPNE3-207ENST00000523588 PPARGC1AQ9UBK2 798 aaKnown RBP8.18□□□□□ -1.1
CPNE3-207ENST00000523588 MBD1Q9UIS9 605 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-207ENST00000523588 CCDC163A0A0D9SF12 145 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 TXKP42681 527 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 GABREP78334 506 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 PRR5P85299 388 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
CPNE3-207ENST00000523588 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 KRTAP1-3Q8IUG1 177 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE3-207ENST00000523588 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 CNTD2Q9H8S5 307 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 SIT1Q9Y3P8 196 aa8.17□□□□□ -1.1
CPNE3-207ENST00000523588 SEMA7AO75326 666 aa8.16□□□□□ -1.1
CPNE3-207ENST00000523588 OLFML2BQ68BL8 750 aa8.16□□□□□ -1.1
CPNE3-207ENST00000523588 ZC3H14Q6PJT7 736 aaKnown RBP8.16□□□□□ -1.1
CPNE3-207ENST00000523588 SGPP1Q9BX95 441 aa8.16□□□□□ -1.1
CPNE3-207ENST00000523588 TMEM260Q9NX78 707 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms