RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 PLS1Q14651 629 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 KCNB1Q14721 858 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TBC1D10BQ4KMP7 808 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MCF2L2Q86YR7 1114 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TMTC1Q8IUR5 882 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TNFRSF25Q93038 417 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 EEF2KMTQ96G04 330 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TBC1D7Q9P0N9 293 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 STX10O60499 249 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 USO1O60763 962 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PRCPP42785 496 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PRKG1Q13976 671 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PTPN21Q16825 1174 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 KRT26Q7Z3Y9 468 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC84Q86UT8 332 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TPH2Q8IWU9 490 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NUP58Q9BVL2 599 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NAA15Q9BXJ9 866 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TRIM9Q9C026 710 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MTFR1LQ9H019 292 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 KCNF1Q9H3M0 494 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 VCPKMTQ9H867 229 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PANK4Q9NVE7 773 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PRR12Q9ULL5 1215 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PCDHAC2Q9Y5I4 1007 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MORC2Q9Y6X9 1032 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 IRS2Q9Y4H2 1338 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PVALEFA0A1B0GWK0 134 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 ARHGEF35A5YM69 484 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 RIOK3O14730 519 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MYCLP12524 364 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 HOXA7P31268 230 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 USP14P54578 494 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PABPC4Q13310 644 aaKnown RBP eCLIP4.33□□□□□ -1.721e-16■■□□□ 11.6
HDAC2-215ENST00000523334 NCAPHQ15003 741 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 KRT31Q15323 416 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 WDR78Q5VTH9 848 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 UNC13DQ70J99 1090 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NELFCDQ8IXH7 590 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 OR8K1Q8NGG5 319 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 CAGE1Q8TC20 777 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 DPF2Q92785 391 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 FAM20AQ96MK3 541 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 VPS33BQ9H267 617 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 DUOX1Q9NRD9 1551 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 SLU7O95391 586 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PLA2G4BP0C869 781 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 SLURP2P0DP57 97 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 UBXN2AP68543 259 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 KRT83P78385 493 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NPY5RQ15761 445 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 PPP4R3AQ6IN85 833 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MKL1Q969V6 931 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 GMCL1Q96IK5 515 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC42Q96M95 316 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 SPAG5Q96R06 1193 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TUBGCP2Q9BSJ2 902 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 WDR11Q9BZH6 1224 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 LZTFL1Q9NQ48 299 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MYO5AQ9Y4I1 1855 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 MYH13Q9UKX3 1938 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 WNK3Q9BYP7 1800 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 DDX39AO00148 427 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 VIL1P09327 827 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 RPS12P25398 132 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SARSP49591 514 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 FXR2P51116 673 aaKnown RBP eCLIP4.32□□□□□ -1.722e-6■■■■□ 24.2
HDAC2-215ENST00000523334 ETF1P62495 437 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PSMD2Q13200 908 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ENOX2Q16206 610 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SUPT20HL1Q3ZLR7 823 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 NT5DC1Q5TFE4 455 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 FKBP1CQ5VVH2 108 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 FAM83AQ86UY5 434 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC125Q86Z20 511 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MICALL2Q8IY33 904 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PDCL2Q8N4E4 241 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PRPF38AQ8NAV1 312 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ACER1Q8TDN7 264 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 DDX12PQ92771 950 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CNOT6LQ96LI5 555 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MYOZ2Q9NPC6 264 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CNOT7Q9UIV1 285 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SCN7AQ01118 1682 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 DDX60Q8IY21 1712 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 A0A087X0B3 334 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 WNT7AO00755 349 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 RHOBTB3O94955 611 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CASP14P31944 242 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 FKBP3Q00688 224 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms