RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 GH2P01242 217 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 CYP2E1P05181 493 aaPredicted RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 STAT1P42224 750 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 ETF1P62495 437 aaKnown RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 SH3RF3Q8TEJ3 882 aaPredicted RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 DCAF4Q8WV16 495 aa17.76■□□□□ 0.43
USP42-207ENST00000521713 SYMPKQ92797 1274 aaKnown RBP17.76■□□□□ 0.43
USP42-207ENST00000521713 TBCKQ8TEA7 893 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 FAM204AQ9H8W3 233 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 ABCD1P33897 745 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 SH2D4BQ5SQS7 431 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 PHLDB2Q86SQ0 1253 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 BANK1Q8NDB2 785 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 TDRD3Q9H7E2 651 aaKnown RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 POLR3EQ9NVU0 708 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 UTP11Q9Y3A2 253 aaKnown RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 XPOTO43592 962 aaKnown RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 APBA1Q02410 837 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 CDC37Q16543 378 aaPredicted RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 ODR4Q5SWX8 454 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 STK10O94804 968 aaKnown RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 GAP43P17677 238 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 SYCE1Q8N0S2 351 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 FAM193BQ96PV7 902 aaPredicted RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 PLA2G12BQ9BX93 195 aa17.75■□□□□ 0.43
USP42-207ENST00000521713 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
USP42-207ENST00000521713 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
USP42-207ENST00000521713 RASSF2P50749 326 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 TBC1D10BQ4KMP7 808 aaPredicted RBP17.74■□□□□ 0.43
USP42-207ENST00000521713 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.74■□□□□ 0.43
USP42-207ENST00000521713 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 NCOA3Q9Y6Q9 1424 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
USP42-207ENST00000521713 C1orf112Q9NSG2 853 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 RNF181Q9P0P0 153 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 MROH7-TTC4A0A0A0MT08 1334 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 SPATA31A5Q5VU36 1347 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 SPATA31A7Q8IWB4 1347 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 MMP1P03956 469 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 TMEM191BP0C7N4 346 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 MIS12Q9H081 205 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 FAM207AQ9NSI2 230 aaPredicted RBP17.74■□□□□ 0.43
USP42-207ENST00000521713 LUC7L3O95232 432 aaKnown RBP17.74■□□□□ 0.43
USP42-207ENST00000521713 MORC3Q14149 939 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 ARHGAP44Q17R89 818 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 GSDMAQ96QA5 445 aa17.74■□□□□ 0.43
USP42-207ENST00000521713 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 SORBS3O60504 671 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
USP42-207ENST00000521713 EFCAB13Q8IY85 973 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 COA7Q96BR5 231 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 HAUS2Q9NVX0 235 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 SEPT9Q9UHD8 586 aaPredicted RBP17.73■□□□□ 0.43
USP42-207ENST00000521713 CD163L1Q9NR16 1453 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 KCNJ18B7U540 433 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 IGBP1P78318 339 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 KCNJ12Q14500 433 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 MAP7D1Q3KQU3 841 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 AP1ARQ63HQ0 302 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 CLIC4Q9Y696 253 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 ERCC3P19447 782 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
USP42-207ENST00000521713 CFAP221Q4G0U5 840 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 ZNF365Q70YC5 407 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 RRAGAQ7L523 313 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 ZNF277Q9NRM2 450 aaPredicted RBP17.73■□□□□ 0.43
USP42-207ENST00000521713 HOXC10Q9NYD6 342 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 CDC25BP30305 580 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 GPSM2P81274 684 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 CAPN7Q9Y6W3 813 aa17.73■□□□□ 0.43
USP42-207ENST00000521713 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 SND1Q7KZF4 910 aaKnown RBP eCLIP17.72■□□□□ 0.43
USP42-207ENST00000521713 GABPB2Q8TAK5 448 aaPredicted RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 E7EVH7 732 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 GCKP35557 465 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 UBXN2AP68543 259 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 ADAM9Q13443 819 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 VSIG1Q86XK7 387 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 RNF10Q8N5U6 811 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms